Name : int
Accession : ACR23122.1
PAI name : HPI
PAI accession : FJ212115
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Not determined
Product : P4-like integrase
Function : -
Note : located within a high-pathogenicity-island (HPI) region
Homologs in the searched genomes : 29 hits ( 25 protein-level, 4 DNA-level )
Publication :
-Schubert,S., Darlu,P., Clermont,O., Wieser,A., Magistro,G., Hoffmann,C., Weinert,K., Matic,I. and Denamur,E., "Direct Submission", Submitted (15-SEP-2008) Bacteriology, Max von Pettenkofer-Institut for Hygiene and Microbiology, Marchioninistr. 17, Munich, Bavaria 81377, Germany.
-Schubert,S., Darlu,P., Clermont,O., Wieser,A., Magistro,G., Hoffmann,C., Weinert,K., Tenaillon,O., Matic,I. and Denamur,E., "Role of intraspecies recombination in the spread of pathogenicity islands within the Escherichia coli species", PLoS Pathog. 5 (1), E1000257 (2009) PUBMED 19132082.
| DNA sequence : | |
CTGGAGGTTGCGTCCCGCACACGGCAGCACCTGAGTAACATAATGCGCCATGCGGTCCATCAGGAGTTAATCGATACGAA
CCCTGCAGCAAACCTTGGCGGCGTGACCACACCTCCTGTCAGACGGCACTATCCTGCCCTGCCGCTGGAGCGGCTGCCTG
AACTGCTTGAACGTATTGGGGCATATCATCAGGGCCGTGAACTGACCCGGCATGCCGTTCTGCTGATGCTGCATGTGTTC
ATTCGCTCCAGTGAACTGCGTTTCGCCCGCTGGTCAGAGATTGATTTCACAAACCGAGTCTGGACGATACCCGCGACGCG
AGAACCCATTATTGGCGTGCGTTATTCCGGCCGCGGGGCAAAAATGCGAATGCCGCATATCGTCCCCCTCTCAGAACAGT
CCATCGCCATTCTGAAACAGATTAAGGATATCACCGGTAATAATGAACTGATCTTCCCCGGCGACCATAACCCGTATAAG
CCAATGTGTGAAAACACGGTCAATAAGGCACTGCGGGTGATGGGTTACGACACGAAAAAGGATATCTGCGGTCACGGCTT
CCGGGCAATGGCATGCAGTGCGCTGATGGAATCGGGTTTATGGGCAAAGGACGCAGTAGAACGCCAGATGAGTCATCAGG
AGCGCAATACCGTGCGCATGGCTTATATTCATAAGGCAGAGCACCTAGAAGCCCGCAAAGCGATGATGCAGTGGTGGTCG
GATTATCTGGAAGCATGCCGAGAATCTTATGCACCGCCTTATACAATTGGTAAAAATAAGTTTATCCCATAG
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| Protein sequence : | |
LEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPALPLERLPELLERIGAYHQGRELTRHAVLLMLHVF
IRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYK
PMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWS
DYLEACRESYAPPYTIGKNKFIP
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