Name : unnamed
Accession : ACL99840.1
PAI name : Type-V SCCmec
PAI accession : FJ544922
Strain : Staphylococcus pseudintermedius ED99
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : -
Homologs in the searched genomes : 5 hits ( 5 protein-level )
Publication :
-Black,C.C., Solyman,S.M., Eberlein,L.C., Bemis,D.A., Woron,A.M. and Kania,S.A., "Identification of a predominant multilocus sequence type, pulsed-field gel electrophoresis cluster, and novel staphylococcal chromosomal cassette in clinical isolates of mecA-containing, methicillin-resistant Staphylococcus pseudintermedius", Vet. Microbiol. 139 (3-4), 333-338 (2009) PUBMED 19604657.
-Kania,S.A., Eberlein,L.C. and Bemis,D.A., "Direct Submission", Submitted (11-DEC-2008) Comparative Medicine, University of Tennessee, 2407 River Dr., Knoxville, TN 37996, USA.
| DNA sequence : | |
ATGCAGTATACGGTTCATATCGATGATCAAATTATAAATAATATAAAAGAGTGTACCAAAAAGTTTAAAATTTTGCCTAT
GGAAGATAAAATTCCATTATCACCGTTGTTACAACCAGAATATGCAGGAGAGGTACAAGATTTTATTAGTACATATGAGC
AGTTTATGATTAATTTTGGTAAAGTAATATTGGATAGTCAAGGCATAAAAATACAGTTTGAAAGTGAATCATTAAGTAGT
ATTCAACGAGGCATTCAAGAACATTGTTACTTAAATGAGCGAACAAATGACATTGATGTGACTAAAGAATGGTATTTATG
CAAATTTTCAAATCAAATATTAGAAGAGGATAAAAATCAATTGTATAATGCTTTAAAGCAACTCATGAATGATTCTAAAA
ATAAAAAGCAAGCTTTTCAAGAGGTGTTTAAGGTTCATATTGATATTTATCTCTACAATAAAGAAAAATCTGAATATAAG
TATCAAGTATCTAGTTATTTCAATCTTGTAAAAGAAAATCCTAAAATAACTTATAAAAAAAGACATTTACAAGAGAAACA
AGGTGTCAAGGGTACAACTTTCACGAACAAATTAAAATTATTGAACAAAATGTATGGTGTAGATGTTGCAAAATATCAGC
CATTTTATAATTCTAATAATCCTGAATATGAAAGAGGTCAATTTGGTGAAAGATACATTTCTCAAAGATCTAACTATGAA
TTTAATAGACTTCAATATCAAATTATAGATATGTTATCGAAAATACTTGATAAGCATCCATTACCAAAGTCAGATAATAA
TTATAAACATATTCCAACTATTGAAAAAGCAATATTAAGTGGGGATTCTCATAGTTTTTATGAGTATTTTGAAGATATAA
TGAAAGAAATTATAAGTATGGAAAATTCTTCTTTAAAGGAAAAATTATTGACTGATTTTACATATCAATCTCAATGTAGA
TGGTACTCTGAAAGTGAAAAATTAAAATTGCAACTTGAAAGTTTTATGCATAAAGTTTTGGAGAGCAATTATTATGAGGG
TAACAAATTATATAGAATGTTGTCTCATGCAATTGAAGAAACAATCAATGAGGCTGATGAAGATAAGGTTCATTTCAATT
ATTTTAAAGATTATTTTTTGACAGACGGTGGGGTGAAGAATTGGGAGCAGATTAGCGAGAAAATTACTGAATTCAATGGT
AAAGTTATTAACGATATCCAAAATGAATATAATAAGATTCAATTTAATAACGCAAATCGAAATCAGAAACTAAACTTTAA
TTATTTATACCATTGCTTTGAGTTTAGTAATAACTTAGTAAAAGCAAGGGTAAATGGAAATAGAGGTTACATTTTATATT
TTGTAGATAAATATAAAATAAAAATGCCCTTTTTGGATCAATTATTAATCAATTATTTGAATCAAGAAATAGGTCAGGAA
AGTATTAATTATAATATGCAAACATTGTTTGAAAAAGAAAGATATGATAGAAGTAGTACCATTGAAAAATTAGTAGCAAC
AAGCAAATTTAAGTATGAAAAAGATGATTCAGATTTATTCAAACAACTTTTCAATGATGTTGAAAATTCAATAGACAGAT
TAGGTATTTACTTACTAAATAATGGTATAAATTCGAATGATGAAAATGCAAGATATTATAGATCGTTTTTAAAGGAACTT
AGTAGAATAAAAAGTAAATTAACGCCATTTTCTCTTGAAATAAGTAAGTCTAGCGGAAGAGAGCAACATTATCCTGATGA
TGCTATTGATGATAAAGATGAGAGAAGAAAAAATAAAGAAGAAACATATCATGCTTTTGATGATAAAAGCGATATTGACT
CCAAATTAAAGAATAAAATAAATGTTTCTATCGATAATTTATTGTCAGTTAAAATTAAGAGCAATTTGTATGATATTAGT
CCAAATACAAAAAAACAATAA
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| Protein sequence : | |
MQYTVHIDDQIINNIKECTKKFKILPMEDKIPLSPLLQPEYAGEVQDFISTYEQFMINFGKVILDSQGIKIQFESESLSS
IQRGIQEHCYLNERTNDIDVTKEWYLCKFSNQILEEDKNQLYNALKQLMNDSKNKKQAFQEVFKVHIDIYLYNKEKSEYK
YQVSSYFNLVKENPKITYKKRHLQEKQGVKGTTFTNKLKLLNKMYGVDVAKYQPFYNSNNPEYERGQFGERYISQRSNYE
FNRLQYQIIDMLSKILDKHPLPKSDNNYKHIPTIEKAILSGDSHSFYEYFEDIMKEIISMENSSLKEKLLTDFTYQSQCR
WYSESEKLKLQLESFMHKVLESNYYEGNKLYRMLSHAIEETINEADEDKVHFNYFKDYFLTDGGVKNWEQISEKITEFNG
KVINDIQNEYNKIQFNNANRNQKLNFNYLYHCFEFSNNLVKARVNGNRGYILYFVDKYKIKMPFLDQLLINYLNQEIGQE
SINYNMQTLFEKERYDRSSTIEKLVATSKFKYEKDDSDLFKQLFNDVENSIDRLGIYLLNNGINSNDENARYYRSFLKEL
SRIKSKLTPFSLEISKSSGREQHYPDDAIDDKDERRKNKEETYHAFDDKSDIDSKLKNKINVSIDNLLSVKIKSNLYDIS
PNTKKQ
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