Name : unnamed
Accession : ACK75595.1
PAI name : VPI
PAI accession : FJ209001
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : -
Homologs in the searched genomes : 1 hits ( 1 protein-level )
Publication :
-Tay,C.Y., Reeves,P.R. and Lan,R., "Importation of the major pilin TcpA gene and frequent recombination drive the divergence of the Vibrio pathogenicity island in Vibrio cholerae", FEMS Microbiol. Lett. 289 (2), 210-218 (2008) PUBMED 19054108.
-Tay,C.Y., Reeves,P.R. and Lan,R., "Direct Submission", Submitted (13-SEP-2008) School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia.
| DNA sequence : | |
ATGTTCAATAAAAAAATTACAATAACTTCAACTGGTATTACGTTGTCTATTTTTTCCTTTATGGCTAAAGCTGATCCTAA
AATTAATTTCGCAGTGGATTATTTCTCTTATGGTGGTAATGGAAGATGTATGGTTGCTATGGAGATCGAAAAAAGTAATT
TAAATGAGATATATAATATAATTAATAAAAATTACTTTGATATCGATTTTGAAGTTTTACTGTATGAGAAAGATAAAAAT
GGAAAAATTGAGAAGCCTCATGGTACAGAGGTGGTTAAATTCAAATTTAATGAATTTGATAACCTTGTTCATGATCATGT
TATTGTCATGTCAAAAATGGAACTTCCATATTCATGGTGGCATGAATGTAAAGTCTTAAGTGTTAATTTATCAGATAAGA
AATATGCTAAAGTTACAATATATGACGATTTTAATGGCGACGTTTCATTTGGAAATATAGTTGAAAATAATAAGATTTCC
AGTTTTGATTTTTTTTCTGATATAGTAAACATGGCATTCGCCTATAGAATGAAAGATGAAAAACCAACAGAGAATGAGAT
CCTCCAGAACATATCCAAAATGAAAAGTTATAATAAGGGAAAGTCAGGGAATGAATCACTAAATAGAAAAATTATTGGAT
ATACAAACACTATATCTTTAGGAGATAGCGGTATAAATGGTTCTATAGGTTTTAATATGTCTGAAGATTTTATTAAATTA
CGAACAAAAGATAAGATCAATAATTTTATAAAAGAAAAAATCGTAAAACCTGCAGTAGAAGTTGGTATCGTTGATCGTAA
ATTTCAAGAATCAAAGTATATTGATGAATTAAGACAGAGACTACTAAAAAGTTTAAATCAAGATCATTACTTTGACTATG
GTTCAGAGAGAAATTTGCAATTATCATTGGTAATGATGTTCTCAGACTTGTACAGTCAGCCTATATTATCCTACGGAAAA
ACGATACCTGCATACAGCGATTCCTTTTTTAGTGATTTATGGGAGTCAATGTTAAGTGGATTCATCAATAGTATTGAACC
TGTGAAATTATATGAACATGAGTCATATCATGGGCATTCGATATCATTAAACATGGATAGTGAATTTTTGCATGGTTTTA
ATGATATTGCTTCATCAATAAAAATTCCGAAAGGGTGGCAAGTTACTTTATTTGAACATGGCGGCTATACTGGTTCTTCT
ATTGTAGCTAATAGTGATATTAAGGCATTAAGAGAGAAGAATCTGAATGATACGGTAAGTTCTTTGATGGTTGAGTATGT
TGGTGATGATCCTTCCGAACTTTAT
|
| Protein sequence : | |
MFNKKITITSTGITLSIFSFMAKADPKINFAVDYFSYGGNGRCMVAMEIEKSNLNEIYNIINKNYFDIDFEVLLYEKDKN
GKIEKPHGTEVVKFKFNEFDNLVHDHVIVMSKMELPYSWWHECKVLSVNLSDKKYAKVTIYDDFNGDVSFGNIVENNKIS
SFDFFSDIVNMAFAYRMKDEKPTENEILQNISKMKSYNKGKSGNESLNRKIIGYTNTISLGDSGINGSIGFNMSEDFIKL
RTKDKINNFIKEKIVKPAVEVGIVDRKFQESKYIDELRQRLLKSLNQDHYFDYGSERNLQLSLVMMFSDLYSQPILSYGK
TIPAYSDSFFSDLWESMLSGFINSIEPVKLYEHESYHGHSISLNMDSEFLHGFNDIASSIKIPKGWQVTLFEHGGYTGSS
IVANSDIKALREKNLNDTVSSLMVEYVGDDPSELY
|
|
