Name : unnamed
Accession : ACK75589.1
PAI name : VPI
PAI accession : FJ208999
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : -
Homologs in the searched genomes : 1 hits ( 1 protein-level )
Publication :
-Tay,C.Y., Reeves,P.R. and Lan,R., "Importation of the major pilin TcpA gene and frequent recombination drive the divergence of the Vibrio pathogenicity island in Vibrio cholerae", FEMS Microbiol. Lett. 289 (2), 210-218 (2008) PUBMED 19054108.
-Tay,C.Y., Reeves,P.R. and Lan,R., "Direct Submission", Submitted (13-SEP-2008) School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia.
| DNA sequence : | |
ATGTTCAATAAAAATATTACAATAACTTCAACTGGTATTACGTTGTCTATTTTTTCCTTTATGGCTAAAGCTGAACCTAA
AATTAATTTCGCAGTGGATTATTTCCCTTATGGCGGTAATGGAAGATGTATGGTTGCTATGGAGATCGAAAAAAGTAATT
TAAATGAGATATATAATATAATTAATAAAAATCACTTTGATATCGATTTTGAAGTTTTACTGTATGAGAAAGATAAAAAT
GGAAAGCTTGAGAAGCCTCATGGTACAGAGATGGTTAAATTCAAATTTAATGAATTTGATAACCTTGTTTATGATCATGC
TATTGTCATGTCAAAAATGGAACTTCCATATTCATGGTGGCATGAATGTAAAGTCTTAAGTGTTAATTTATCAGATAAGA
AATATGCTAATGTTAAGATATATGACGATTTTAATGGCGAAGTTTTATTTGTAAGTATAGTTGAGAGTAATAAGATTTCC
AGTTTTGATTTTTTTTCTGATATAGTAAATATGGCTTTCGCCTATAGAATGAAAGATGCAAAACCAACAGAGAATGAGAT
CCTCCAGAACATATCAAAAATGAAAAGTTATAATAAAGGAAATGAATCACTAAATAGAAAAATTATTGGATATACAAACA
CTATCTCTAAAGGTGATAGTGGCATAAATGGTTCTATAGGTTTTAATATATCTGAAGATTTCATTAAACTACGAACAAAA
GATAAGATCAATAATTTTATAAAAGAAAAAATCGTAAAACCTGCAGTAGAAGTTGGTATCGTTGATCGTAAGTTTCAAGA
ATCAAAGTATATTGATGAATTAAGGCAGAGATTGCTAAAAACTTTAAATCAAGATCATTACTTTGACTATGGTTCAGAGA
AAAATTTGCAACTATCATTAGTAATGATGTTTTCAGACTTATATAGTCAGCCTATATTACCTTACGGAAAGGCGATACCT
GCATACAGCGATTCCTTTTTTAGTGATTTATGGGAATCAATGTTAAATGGATTCATTAATAGTATTGAACCTGTAAGAAT
ATATGAACATGAGTCATATCTAGGACGTTCGATGTCATTGAATCAGGATATTAATTTTTTGCATGGTTTTAATGATCTGG
CTTCATCAATAAAAATTCCGAAAGGATGGCAAGTTACTTTATTTGAACATGGCGACTATACTGGTTCTTCTATTGTAGCT
AATGGTGATATTAAGGCATTAAGCGAGAAAAATCTGAATGATACGGTAAGTTCTTTGATGGTTGAGTATGTTGGTGATGA
TCCTTCCGAACTCTAT
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| Protein sequence : | |
MFNKNITITSTGITLSIFSFMAKAEPKINFAVDYFPYGGNGRCMVAMEIEKSNLNEIYNIINKNHFDIDFEVLLYEKDKN
GKLEKPHGTEMVKFKFNEFDNLVYDHAIVMSKMELPYSWWHECKVLSVNLSDKKYANVKIYDDFNGEVLFVSIVESNKIS
SFDFFSDIVNMAFAYRMKDAKPTENEILQNISKMKSYNKGNESLNRKIIGYTNTISKGDSGINGSIGFNISEDFIKLRTK
DKINNFIKEKIVKPAVEVGIVDRKFQESKYIDELRQRLLKTLNQDHYFDYGSEKNLQLSLVMMFSDLYSQPILPYGKAIP
AYSDSFFSDLWESMLNGFINSIEPVRIYEHESYLGRSMSLNQDINFLHGFNDLASSIKIPKGWQVTLFEHGDYTGSSIVA
NGDIKALSEKNLNDTVSSLMVEYVGDDPSELY
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