Name : tagA
Accession : ACK75586.1
PAI name : VPI
PAI accession : FJ208998
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Not determined
Product : truncated ToxR-activated A protein
Function : -
Note : -
Homologs in the searched genomes : 6 hits ( 6 protein-level )
Publication :
-Tay,C.Y., Reeves,P.R. and Lan,R., "Importation of the major pilin TcpA gene and frequent recombination drive the divergence of the Vibrio pathogenicity island in Vibrio cholerae", FEMS Microbiol. Lett. 289 (2), 210-218 (2008) PUBMED 19054108.
-Tay,C.Y., Reeves,P.R. and Lan,R., "Direct Submission", Submitted (13-SEP-2008) School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia.
| DNA sequence : | |
ATGAAAGTTTCTTTTGCAATACTTATTTTCTTAGTTGGATGTAATGAGAATACAACATCCAGTAACGACCAGTATTTGAC
TGATCCTGATATAAGTGAACAAACAAAGAAGCCATCAAGGCCTATAATTGATGAAAAAAATAAAGGTGTAACAGATACGT
CGGTTACAATAGAATGGAATAAGATTGAGTGTGAAAAAAATTTTAGTCATTATAATGTAATTGTCTATAGAAAAGATCGA
ATAGAAGATGTAATAACTATCAGAACTAGGAATAATAGTGTTTTTATCGATGATTTAAAACCTAACAACCAGTATTCTAT
AGATGTCTCAAGTTGTTTACACTCTGCTTGTTCAGAAAGCGCAAAAATAGAATTCATTACGCTGAACGAGATAGATTATT
ATCACACCACAGAAATAGAAAAAAATGTGTATGGCAGCTTGGAAGGTGAAGTTAGATTTGTGCAAACGCATGTCATTTCT
CCTGAGGGTAGAAAGAATGAGCCTGAAATAATCACAGGAAGAGATGCATTAATATTGTTTAAGCCATTAATAAAAATCTC
AAGTTCAATTTTGATGAAAATTTATTCAGAAGATGGGCTCACTAGCAAAGTTGTAATGAAATCACCATCTGTGTTGCCAA
AAAATGATCAACCAATAGCTATTGATGAAAATAATAAAGTTGTAAGTTACTCTAACTCATATTGGAGTGCAGAAATACCA
TGGGATAAAATGAAAAGTGGTATGTCATTACATTTTGAAGATGAAAACGGCAACTTAGGTATTATTGAGTCAGAAGGTAT
AAAATTTTCAGCACCTAGTGAATTGATTATTCAAAATATAGATCTTGGAATGTTATATAAACCAAGAGGAAGAAATGTCG
TAATAAAAGAATTGGAAAGAACAGCCGTCGATTACTTTCAGAAAGTTCCTGTCTCAAAGTTGATTTTTTCAGATTATACC
CCTATTCATTTTGAAAAAATAACATTACCAAATGGTACAGTATATACTGAGAAAAGTGCTGATATAGGTGGATGGCATCA
AGGTGATATGAGAGAAGCAGTAGGGAAAGCACTAGTATCTACCGGAATAAATAATGCTAATTTAGGTATAGTTGCCTCAT
CAGGATATTCTCAACAATACAACATATTAACGAATCATATTACCGCACACACAAATATTGGATATTATAACAATGGAGTG
GTTGTGCATGGAGGGAGTGGTGGTGGTGGGATCGTTACACTAGAAAATACACTTTATAACGAATGGTCTCATGAATTGGG
ACATAACTATGGATTGGGACATTATGTTGCTGGTGGTACTAGTCATGGACCTGATACTTCATGGGGGTGGGATGGCTATT
ATAAAAGATTCATAGCTAACTTTGATTGGAAACGTTCACCACAATCAAATATAAGGCCAGATAATCAAGAAGTTGTTAAG
CCCTTCATGGGCAAGTATACGTATCTTTGGGATGCAATGTCTGGAGGATATGACCATCAAAATGGAATAATCAGTAGATA
TACACTTCATCATCCATATGTTGCAAGAATTATCCAAGATTGGCTTAAAAATGGGGCTGTTGTAAAGAATAATGATTACA
TGGTTTGGGATGAATTAAAAAATATCTATGTGTATAAGGAAACGAACTTCAAAGTTCCAGAGAAAAAAGGTGTACCTGTT
GTGACGATATTAGGAGTTTATGACCCTGAAAAAGTTAATCCAAGTCAATTGTATCCTCCTACATATAGTAATTATGGAAA
TGTATTTGATTTAGAAAAACCACGTTCTGAATCATCCTTAAGAGGATGGCAGTATGTTAAAAATATAAATAATCTAGATA
GAGTAAATACACATTGGCATACTATGCTGGTAAATAGAAAAGAAGAAAAAATATGTCGATTTTCTTATCTAAGCCCTAAA
GGTAAAAAATTTGAATTTTTAGGTTATGAAGACACCGAGAATAAAATATGTACAGGAGGTAGAAGTATACACTATTTAGA
AGACGGTAAGAGAAATTCAATAGAATCCAAATTTAATGACTACTATTTATTGTCAGAAGATGGTGATGGGGAATTAACCT
ATGTACCCGACCCTACTATTGGAGAAAGTAAAATTTGTTCACTAAAAGCGTCTGGTTCTATGTACGGTTCAGGATTTATT
AAAGGAAACTCTTGTCGGCAAGTTGATGGTGTCACTATGAACGGGCTTCAATGGGCTTTTACAATAAATCAATCAGGAGT
AAATAGTACCTATACATGGTCAAATGAATGTGTATTAAAAATTAAAGATAAAGATAATAAGATTGAATCAATATCGATAC
CAAATTATAGAATAGAAAAAAATCAGAGTAATAAAATTCATCTTAATATAAGCAGAGAAAAGACCATAATAGAAATTGAC
GTGTATTGTGGAGAACATGAGTTAACTAGAATAAAGGTTTCTGATAATCCTGATATAAAATTACTAAAAGGACCTATTAT
TGTTGGGCAAGAGCATGGTTACACAAGCTATGAGCCTAAGCTTCCTAGTGGTTGGTTCAAACATTATGACAATTTTGAGC
CCAAAAATGAAATCAACCATGAATTAGGAAAGATGCGTGTAAATGATAATGATGAATATATTTGTCGATTTAATTTTTCT
GATTCAGATAGGGAAATGAAATTTGTTGGCTATGTGAGTCAATTATCTGAAAGTAAGTACATTTGTACTGGTGGAAGTGA
GATCTATTACAAGAAAAACGACATTAATATTGAACTATCATCAAAAGAAAACGATTTTGAATGGTTATCCGTAAGAGATA
AAAATTTAGTAGGATCAAAAATAGAATTTGATAACAATAAGACATTGTGCGTATTAGATAATAGTTCATTTTATGGTGCT
GGTTACCTCGATGAAAACAATAGATGTACACAAGATAGACAAATTCATTGGTCTAATGGTAAACAATGGTTATTTAGTAC
TTATAAAACTATAACCTACCATTAA
|
| Protein sequence : | |
MKVSFAILIFLVGCNENTTSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTDTSVTIEWNKIECEKNFSHYNVIVYRKDR
IEDVITIRTRNNSVFIDDLKPNNQYSIDVSSCLHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVIS
PEGRKNEPEIITGRDALILFKPLIKISSSILMKIYSEDGLTSKVVMKSPSVLPKNDQPIAIDENNKVVSYSNSYWSAEIP
WDKMKSGMSLHFEDENGNLGIIESEGIKFSAPSELIIQNIDLGMLYKPRGRNVVIKELERTAVDYFQKVPVSKLIFSDYT
PIHFEKITLPNGTVYTEKSADIGGWHQGDMREAVGKALVSTGINNANLGIVASSGYSQQYNILTNHITAHTNIGYYNNGV
VVHGGSGGGGIVTLENTLYNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIRPDNQEVVK
PFMGKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVKNNDYMVWDELKNIYVYKETNFKVPEKKGVPV
VTILGVYDPEKVNPSQLYPPTYSNYGNVFDLEKPRSESSLRGWQYVKNINNLDRVNTHWHTMLVNRKEEKICRFSYLSPK
GKKFEFLGYEDTENKICTGGRSIHYLEDGKRNSIESKFNDYYLLSEDGDGELTYVPDPTIGESKICSLKASGSMYGSGFI
KGNSCRQVDGVTMNGLQWAFTINQSGVNSTYTWSNECVLKIKDKDNKIESISIPNYRIEKNQSNKIHLNISREKTIIEID
VYCGEHELTRIKVSDNPDIKLLKGPIIVGQEHGYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFS
DSDREMKFVGYVSQLSESKYICTGGSEIYYKKNDINIELSSKENDFEWLSVRDKNLVGSKIEFDNNKTLCVLDNSSFYGA
GYLDENNRCTQDRQIHWSNGKQWLFSTYKTITYH
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