Name : unnamed
Accession : ACK75584.1
PAI name : VPI
PAI accession : FJ208997
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : -
Homologs in the searched genomes : 1 hits ( 1 protein-level )
Publication :
-Tay,C.Y., Reeves,P.R. and Lan,R., "Importation of the major pilin TcpA gene and frequent recombination drive the divergence of the Vibrio pathogenicity island in Vibrio cholerae", FEMS Microbiol. Lett. 289 (2), 210-218 (2008) PUBMED 19054108.
-Tay,C.Y., Reeves,P.R. and Lan,R., "Direct Submission", Submitted (13-SEP-2008) School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia.
| DNA sequence : | |
ATGTTCAATAAAAAAATTACAATAACTTCAACTGGTATTACGTTGTCTATTTTTTCCTTTATGGCTAAAGCTGATCCTAA
AATTAATTTCGCAGTGGATTATTTCTCTTATGGTAGTAATGGAAGATGTATGGTTGCTATGGAGATCGAAAAAAGTAATT
TAAATGAAATATATAATATAATTAATAAAAATCACTTTGATATCGATTTTGAAGTTTTACTGTATGAGAAAGATAAAAAT
GGAAAAATTGAGAAGCCTCATGGTACAGAGATGGTTAAATTCAAATTTAATGAATTTGATAACCTTGTTCATGATCATGT
TATTGTCATGTCAAAAATGGAACTTCCATATTCATGGTGGCATGAATGTAAAGTCTTAAGTGTTAATTTATCAGATAAGA
AATATGCTAAAGTTACAATATATGACGATTTTAATGGCGACGTTTCATTTAGAAATATAGTTGAAAATAATAAGATTTCC
AGTTTTGATTTCTTTTCTGATATAGTAAGCATGGCATTCGCCTATAGAATGAAAGATGAAAAACCAACAGAGAATGAGAT
CCTCCAGAACATATCCAAAATGAAAAGTTATAATAATGGAAAGTCAGGGAATGAATCACTAAATAGAAAAATTATTGGAT
ATACAAACACTATATCTTTAGGAGATAGTGGTATAAATGGTTCTATAGGTTTTAATATATCTGAAGATTTCATTAAATTA
CGAACAAAAGATAAGATCAATAATTTTATAAAAGAAAAAATCGTAAAACCTGCAGTAGAAGTTGGTATCGTTGATCGTAA
ATTTCAAGAATCAAAGTATATTGATGAATTAAGACAGAGACTACTAAAAAGTTTAAATCAAGATCATTACTTTGAATATG
GTTCAGAGAAAAATTTGCAATTATCATTGGTAATGATGTTCTCAGACTTGTACAGTCAGCCTATATTATCCTACGGAAAA
ACGATACCTGCATACAGCGATTCCTTTTTTAGTGATTTATGGGAGTCAATGTTAAGTGGATTCATCAATAGTATTGAACC
TGTGAAATTATATGAACATGAGTCATATCATGGGCATTCGATATCATTAAACATGGATAGTGAATTTTTGCATGGCTTTA
ATGATATTGCTTCATCAATAAAAATTCCGAAAGGGTGGCAAGTTACTTTATTTGAACATGGCGGATTTACTGGTTCTTCT
ATTGTAGCTAATAGTGATATTAAGGCATTAGGAGAGAAGAATCTGAATGATACGGTAAGTTCTTTGATGGTTGAGTATGT
CGGTGATGATCCTTCCGAACTCTAT
|
| Protein sequence : | |
MFNKKITITSTGITLSIFSFMAKADPKINFAVDYFSYGSNGRCMVAMEIEKSNLNEIYNIINKNHFDIDFEVLLYEKDKN
GKIEKPHGTEMVKFKFNEFDNLVHDHVIVMSKMELPYSWWHECKVLSVNLSDKKYAKVTIYDDFNGDVSFRNIVENNKIS
SFDFFSDIVSMAFAYRMKDEKPTENEILQNISKMKSYNNGKSGNESLNRKIIGYTNTISLGDSGINGSIGFNISEDFIKL
RTKDKINNFIKEKIVKPAVEVGIVDRKFQESKYIDELRQRLLKSLNQDHYFEYGSEKNLQLSLVMMFSDLYSQPILSYGK
TIPAYSDSFFSDLWESMLSGFINSIEPVKLYEHESYHGHSISLNMDSEFLHGFNDIASSIKIPKGWQVTLFEHGGFTGSS
IVANSDIKALGEKNLNDTVSSLMVEYVGDDPSELY
|
|
