Name : tagA
Accession : ACK75583.1
PAI name : VPI
PAI accession : FJ208997
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Not determined
Product : truncated ToxR-activated A protein
Function : -
Note : -
Homologs in the searched genomes : 6 hits ( 6 protein-level )
Publication :
-Tay,C.Y., Reeves,P.R. and Lan,R., "Importation of the major pilin TcpA gene and frequent recombination drive the divergence of the Vibrio pathogenicity island in Vibrio cholerae", FEMS Microbiol. Lett. 289 (2), 210-218 (2008) PUBMED 19054108.
-Tay,C.Y., Reeves,P.R. and Lan,R., "Direct Submission", Submitted (13-SEP-2008) School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia.
| DNA sequence : | |
ATGAAAGTTTCTTTTGCAATACTTATTTTCTTAGTTGGATGTAATGAGAATGCAACATCCAGTAACGACCAGTATTTGAC
TGATCCTGATATAAGTGAACAAACAAAGAAGCCATCAAGGCCTATAATTGATGAAAAAAATAAAGGTGTAACAGATACTT
CGGTTACAATAGAATGGGATAAGATTGAGTGTGAAAAAAATTTTAGTCATTATAATGTAATTGTCTATAGAAAAGATCGA
ATAGAAGATGTAATAACTATCAGAACTAGGAATAATAGTGTTTTTATCGATGATTTAAAACCTAACAGCCAGTATTCTAT
AGATGTCTCAAGTTGTTTACACTCTGCTTGTTCAGAAAGCGCAAAAATAGAATTCATTACGTTGAACGAGATAGATTATT
ATCACACCACAGAAATAGAAAAAAATGTGTATGGAAGCTTGGAAGGTGAAGTTAGATTTGTGCAAACGCATGTCATTTCT
CCTGAGGGTAGAAAGAATGAGCCTGAAATAATCACAGGAAGAGATGCATTAATATTGTTTAAGCCATTAATAAAAAACTC
AAGTTCAATTTTGATGAAAATTTATTCAGAAGATGGACTCACTAGCAAAGTTGTAATGAAATCACCATCTATGTTGCCAA
AAACTGATCAACCAATAGATATTGATGAAAATAATAAAGTTGTAAGTTACTCTAACTCATATTGGAGTGCAGAGATACCA
TGGAATAAAATGAAAAGTGGTATGTCATTACATTTTGAAGACGAAAACGGCAACTTAGGTATTATTGAGTCAGAACGTAT
AAAATTTTCAGCACCTAGTGAATTGATTATTCAAAATATAGATCTTGGAATGTTATATAAACCAAGAGGAAGAAATATCG
TAATAAAAGAATTGGAAAGAACAGCCGTTGATTACTTTCAGAAAGTTCCTGTCTCAAAGTTGATTTTTTCAGATTATACC
CCTATTCATTTTGAAAAAATAACATTACCAAATGGTACAGTATATACTGAGAAAAGTGCTGATATAGGTGGATGGCATCA
AGGTGATATGAGAGAAGCAGTAGGGAAAGCACTAGTATCTACCGGAATAAATAATGCTAATTTAGGTATAGTTGCCTCGT
CAGGATATTCTCAACAATACAACAGATTAACGAATCATATTACCGCACACACAAATATTGGATATTATAACAATGGAGTG
ATTGTGCATGGAGGGAGTGGTGGTGGTGGGATCGTTACACTAGAAAATACACTTCATAACGAATGGTCTCATGAATTGGG
ACATAACTATGGATTGGGACATTATGTTGCAGGTGGTACTAGTCATGGACCTGATACTTCATGGGGTTGGGATGGCTATT
ATAAAAGATTCATAGCTAACTTTGATTGGAAACGTTCACCACAATCAAATATAAGGCCAGATAATCAAGAAGTTGTTAAG
CCCTTCATGGACAAGTATACATATCTTTGGGATGCAATGTCTGGAGGATATGACCATCAAAATGGAATCATTAGTAGATA
TACACTTCATCATCCATATGTTGCAAGAATTATCCAAGATTGGCTTAAAAATGGGGCTGTTGTAATAAATAATGATTATA
TGGTTTGGGATGAATTAAAAAATATCTATGTGTATAAGGGAACGAACTTCAAAGTTCCAATAAAAAAAGGTGTACCTGTT
GTGACGATATTAGGGGTTTATGATCCTGACAAAATTAATCCAAGTCAGTTGTATTCTCCGACATACAGCAATTATGGGAA
TATATTCGATTTAGAAAAACCTCGTTCAGAATCATCCTTAAAAGGGTGGCAATATGTTAAAGATGTCAACTATCTAGATA
GAGTTAATACACATTGGCATACGATGCTCGTAAATAGAAAAGAAGAAAAAATATGTCGATTTTCTTATCTAAGCCCTAAA
GGTAAAAAATTTGAATTTCTAGGGTATGAAGACATTGAGAATAAAATATGCACAGGAGGTAGAAGTATTCACTATTTAGA
AGACGGCAAGAAAAATCCAATAGAATCCAAGTATAATGATTATTTTTTATTATCAATAGATGGTGATGGAGAAATAAGTT
ATGTTCCTGATTCTACTATTGGTGAAAGTAAAATATGTTCACTAAAGATGTCTGGTACTGTATACGGTGCAGGTTTTATT
AAAGGAAACTCTTGTCGGCAAATTGACGGTGTTTTTATGAACGGATTTCAATGGGCTTTTACATTAAATCAATCAGGAGT
AAATAGTACCTATACATGGTCAAATGAATGTGTATTAAAAATTAAAGATAAAGATAATAATATTGAATCAATATCGATAC
CAAATTATAGAATAGAAAAAAATCAGAGTAATAAAATTCATCTTAATATAAGCAGAGAAAAGCCCATAATAGATATTAAC
GTGTATTGTGGAGAACATGAGTTAACTAGCATAAAGGTTTCTGATAATCCTGATATAAAATTACTAAAAGGACCTATTAT
TGTTGGGCAAGAGCATGGTTACACAAGCTATGAGCCTAAGCTTCCTAGTGGTTGGTTCAAACATTATGACAATTTTGAAC
CCAAAAATGAAATCAACCATGAATTAGGAAAGATGCGTGTAAATGATAATGATGAATATATTTGTCGATTTAATTTTTCT
GATTCAGATAGGGAAATGAAATTTGTTGGTTATGTGAGTCAATTATCTGAAAGTAAGTACATTTGTACTGGTGGAAGTGA
GATCTATTACAATAAAAACGACATTAATATTGAACTATCATCAAAAGAAAACGATTTTGAATGGTTATCAGTAAGAGATA
AAAATTTGGTAGGTTCAAAAATAGAATTTGATAACAATAAGACATTGTGCGTATTAGATAATAGATCATTTTATGGTGCT
GGTTACCTCGATGAAAACAATAGATGTACACAAGATAGACAAATTCATTGGTCTAATGGTAAACAATGGTTATTTAGTAC
TTATAAAACGATGACCTACCATTAA
|
| Protein sequence : | |
MKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTDTSVTIEWDKIECEKNFSHYNVIVYRKDR
IEDVITIRTRNNSVFIDDLKPNSQYSIDVSSCLHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVRFVQTHVIS
PEGRKNEPEIITGRDALILFKPLIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSNSYWSAEIP
WNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRNIVIKELERTAVDYFQKVPVSKLIFSDYT
PIHFEKITLPNGTVYTEKSADIGGWHQGDMREAVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTNIGYYNNGV
IVHGGSGGGGIVTLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIRPDNQEVVK
PFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINNDYMVWDELKNIYVYKGTNFKVPIKKGVPV
VTILGVYDPDKINPSQLYSPTYSNYGNIFDLEKPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKICRFSYLSPK
GKKFEFLGYEDIENKICTGGRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSGTVYGAGFI
KGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESISIPNYRIEKNQSNKIHLNISREKPIIDIN
VYCGEHELTSIKVSDNPDIKLLKGPIIVGQEHGYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDEYICRFNFS
DSDREMKFVGYVSQLSESKYICTGGSEIYYNKNDINIELSSKENDFEWLSVRDKNLVGSKIEFDNNKTLCVLDNRSFYGA
GYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH
|
|
