Name : unnamed
Accession : ACK75579.1
PAI name : VPI
PAI accession : FJ208995
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : -
Homologs in the searched genomes : 1 hits ( 1 protein-level )
Publication :
-Tay,C.Y., Reeves,P.R. and Lan,R., "Importation of the major pilin TcpA gene and frequent recombination drive the divergence of the Vibrio pathogenicity island in Vibrio cholerae", FEMS Microbiol. Lett. 289 (2), 210-218 (2008) PUBMED 19054108.
-Tay,C.Y., Reeves,P.R. and Lan,R., "Direct Submission", Submitted (13-SEP-2008) School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia.
| DNA sequence : | |
ATGTTCGATAAAAAAAATACAATAACTTTAACTGGTATTGTGTTATCTATTTTTTCCTTTATGGTTAAAGCTGAACCTAA
AATTAATTTCGCAGTGGATTATTTCTCTTATGGTGGTAATGGAAGATGTATGGTTGCTATGGAGATCGAAAAAAGTAATT
TAAGTGAGATATATAAAATAATTAATAAAAATCACTTTGATATCGATTTTGAAGTTTTACTGTATGAGAAAGATAAAAAT
GGGAAAATTAAGAAGACTCATGGTGCAGAGATTATTAAATTCAAATTTAATGAATTTGAAAATCTTGTTTATAATCATGC
TATTGTAACATCAAAAATGGAGTTTCCATATTCATGGTGGCATGAATGTAAAATATTAAGCGTTAATTTGTCGGATGAAA
AACATTCAAAAATAACAAGGAGTGATGATTTTAGTGGTGATGTTTCATTTAGTGCCTTAGTTGATAATAACAAAATTTCC
AGTTTTGATTTTTTTTCTGATATAGTGAATATGGCATTTAAATATAGAATGATAGATGTAAAACCCACAGAGAACGAAAT
AGTCCATAATATATACAAAATGAAGGGGTATAATCAAGGTAAATTGGTCAGTGAATCTCTGAGTAGAAAAATTATTGGAT
ATACAAGCACTATATCCTCAGAAGATAGTGGAATAAACGGTTCAATAGGTTTTAATATCTCTGAGGATTTCATTAAATTA
CGAACAAAAGATAAGATCAATAATTTTATAAAAGAAAAAATCGTAAAACCTGCAGTAGAAGTTGGTATCGTTGATCGTAA
ATTTCAAGAAGCAAAGTATATTGATGAATTAAGGCAGAGACTGCTAAAAACTTTAAATCAAGATCATTACTTTGACTATG
GTTCAGAGAAAAATTTGCAATTATCATTAGTAATGATGTTTTCAGACTTATATAGTCAGCCTATATTACCTTACGGAAAG
GCGATACCAGCATACAGCGATTCCTTTTTTAGTGATTTATGGGAATCAATGTTAAATGGATTCATCAATAGTATTGAACC
TGTAAGAATATATGAACATGAGTCATATCTAGGACGTTCGATGTCATTGAAGCAGGATATTAATTTTTTGCATGGTTTTA
ATGATCTGGCTTCATCAATAAAAATTCCGAAAGGATGGCAAGTTACTTTATTTGAACATGGCGACTATACTGGTTCTTCT
ATTGTAGCTAATAGTGATATTAAGGCATTAAGAGAGAAGAATCTGAATGATACGGTAAGTTCTTTGATGGTTGAGTATGT
TGGTGATGATCCTTCCGAACTCTAT
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| Protein sequence : | |
MFDKKNTITLTGIVLSIFSFMVKAEPKINFAVDYFSYGGNGRCMVAMEIEKSNLSEIYKIINKNHFDIDFEVLLYEKDKN
GKIKKTHGAEIIKFKFNEFENLVYNHAIVTSKMEFPYSWWHECKILSVNLSDEKHSKITRSDDFSGDVSFSALVDNNKIS
SFDFFSDIVNMAFKYRMIDVKPTENEIVHNIYKMKGYNQGKLVSESLSRKIIGYTSTISSEDSGINGSIGFNISEDFIKL
RTKDKINNFIKEKIVKPAVEVGIVDRKFQEAKYIDELRQRLLKTLNQDHYFDYGSEKNLQLSLVMMFSDLYSQPILPYGK
AIPAYSDSFFSDLWESMLNGFINSIEPVRIYEHESYLGRSMSLKQDINFLHGFNDLASSIKIPKGWQVTLFEHGDYTGSS
IVANSDIKALREKNLNDTVSSLMVEYVGDDPSELY
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