Name : tagA
Accession : ACK75575.1
PAI name : VPI
PAI accession : FJ208994
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Virulence
Product : ToxR-activated A protein
Function : -
Note : -
Homologs in the searched genomes : 6 hits ( 6 protein-level )
Publication :
-Tay,C.Y., Reeves,P.R. and Lan,R., "Importation of the major pilin TcpA gene and frequent recombination drive the divergence of the Vibrio pathogenicity island in Vibrio cholerae", FEMS Microbiol. Lett. 289 (2), 210-218 (2008) PUBMED 19054108.
-Tay,C.Y., Reeves,P.R. and Lan,R., "Direct Submission", Submitted (13-SEP-2008) School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia.
| DNA sequence : | |
ATGATTTTTTCGAAAAATGTTTACGAGGAGTTAGTGGTGGTAAGATATTCACTCTTAATGAAAGTTTCTTTTGCAATACT
TATTTTCTTAGTTGGATGTAATGAGAATGCAACATCCAGTAACGACCAGTATTTGACTGATCCTGATATAAGTGAACAAA
CAAAGAAGCCATCAAGGCCTATAATTGATGAAAAAAATAAAGGTGTAACAGATACTTCGGTTACAATAGAATGGGATAAG
ATTGAGTGTGAAAAAAATTTTAGTCATTATAATGTAATTGTCTATAGAAAAGATCGAATAGAAGATGTAATAACTATCAG
AACTAGGAATAATAGTGTTTTTATCGATGATTTAAAACCTAACAGCCAGTATTCTATAGATGTCTCAAGTTGTTTACACT
CTGCTTGTTCAGAAAGCGCAAAAATAGAATTCATTACGTTGAACGAGATAGATTATTATCACACCACAGAAATAGAAAAA
AATGTGTATGGAAGCTTGGAAGGTGAAGTTAGATTTGTGCAAACGCATGTCATTTCTCCTGAGGGTAGAAAGAATGAGCC
TGAAATAATCACAGGAAGAGATGCATTAATATTGTTTAAGCCATCAATAAAAAACTCAAGTTCAATTTTGATGAAAATTT
ATTCAGAAGATGGACTCACTAGCAAAGTTGTAATGAAATCACCATCTATGTTGCCAAAAACTGATCAACCAATAGATATT
GATGAAAATAATAAAGTTGTAAGTTACTCTAACTCATATTGGAGTGCAGAGATACCATGGAATAAAATGAAAAGTGGTAT
GTCATTACATTTTGAAGACGAAAACGGCAACTTAGGTATTATTGAGTCAGAACGTATAAAATTTTCAGCACCTAGTGAAT
TGATTATTCAAAATATAGATCTTGGAATGTTATATAAACCAAGAGGAAGAAATATCGTAATAAAAGAATTGGAAAGAACA
GCCGTTGATTACTTTCAGAAAGTTCCTGTCTCAAAGTTGATTTTTTCAGATTATACCCCTATTCATTTTGAAAAAATAAC
ATTACCAAATGGTACAGTATATACTGAGAAAAGTGCTGATATAGGTGGATGGCATCAAGGTGATATGAGAGAAGCAGTAG
GGAAAGCACTAGTATCTACCGGAATAAATAATGCTAATTTAGGTATAGTTGCCTCGTCAGGATATTCTCAACAATACAAC
AGATTAACGAATCATATTACCGCACACACAAATATTGGATATTATAACAATGGAGTGGTTGTGCATGGAGGGAGTGGTGG
TGGTGGGATCGTTACACTAGAAAATACACTTCATAACGAATGGTCTCATGAATTGGGACATAACTATGGATTGGGACATT
ATGTTGCAGGTGGTACTAGTCATGGACCTGATACTTCATGGGGTTGGGATGGCTATTATAAAAGATTCATAGCTAACTTT
GATTGGAAACGTTCACCACAATCAAATATAAGGCCAGATAATCAAGAAGTTGTTAAGCCCTTCATGGACAAGTATACATA
TCTTTGGGATGCAATGTCTGGAGGATATGACCATCAAAATGGAATCATTAGTAGATATACACTTCATCATCCATATGTTG
CAAGAATTATCCAAGATTGGCTTAAAAATGGGGCTGTTGTAATAAATAATGATTATATGGTTTGGGATGAATTAAAAAAT
ATCTATGTGTATAAGGGAACGAACTTCAAAGTTCCAATAAAAAAAGGTGTACCTGTTGTGACGATATTAGGGGTTTATGA
TCCTGACAAAATTAATCCAAGTCAATTGTATCCTCCGACATACAGCAATTATGGAAATATATTCGATTTAGAAAAACCTC
GTTCAGAATCATCCTTAAAAGGGTGGCAATATGTTAAAGATGTCAACTATCTAGATAGAGTTAATACACATTGGCATACG
ATGCTCGTAAATAGAAAAGAAGAAAAAATATGTCGATTTTCTTATCTAAGCCCTAAAGGTAAAAAATTTGAATTTCTAGG
GTATGAAGACATTGAGAATAAAATATGCACAGGAGGTAGAAGTATTCACTATTTAGAAGACGGCAAGAAAAATCCAATAG
AATCCAAGTATAATGATTATTTTTTATTATCAATAGATGGTGATGGAGAAATAAGTTATGTTCCTGATTCTACTATTGGT
GAAAGTAAAATATGTTCACTAAAGATGTCTGGTACTGTATACGGTGCAGGTTTTATTAAAGGAAACTCTTGTCGGCAAAT
TGACGGTGTTTTTATGAACGGATTTCAATGGGCTTTTACATTAAATCAATCAGGAGTAAATAGTACCTATACATGGTCAA
ATGAATGTGTATTAAAAATTAAAGATAAAGATAATAATATTGAATCAATATCGATACCAAATTATAGAATAGAAAAAAAT
CAGAGTAATAAAATTCATCTTAATATAAGCAGAGAAAAGCCCATAATAGATATTAACGTGTATTGTGGAGAACATGAGTT
AACTAGCATAAAGGTTTCTGATAATCCTGATATAAAATTACTAAAAGGACCTATTATTGTTGGGCAAGAGCATGGTTACA
CAAGCTATGAGCCTAAGCTTCCTAGTGGTTGGTTCAAACATTATGACAATTTTGAACCCAAAAATGAAATCAACCATGAA
TTAGGAAAGATGCGTGTAAATGATAATGATGAATATATTTGTCGATTTAATTTTTCTGATTCAGATAGGGAAATGAAATT
TGTTGGTTATGTGAGTCAATTATCTGAAAGTAAGTACATTTGTACTGGTGGAAGTGAGATCTATTACAAGAAAAACGAAA
TTAATATTGAACTATCATCAAAAGAAAACGATTTTGAATGGTTATCAGTAAGAGATAAAAATTTGGTAGGATCAAAAATA
GAATTTGATAACAATAAGACATTGTGCGTATTAGATAATAGATCATTTTATGGTGCTGGTTACCTCGATGAAAACAATAG
ATGTACACAAGATAGACAAATTCATTGGTCTAATGGTAAACAATGGTTATTTAGTACTTATAAAACGATGACCTACCATT
AA
|
| Protein sequence : | |
MIFSKNVYEELVVVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTDTSVTIEWDK
IECEKNFSHYNVIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSCLHSACSESAKIEFITLNEIDYYHTTEIEK
NVYGSLEGEVRFVQTHVISPEGRKNEPEIITGRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDI
DENNKVVSYSNSYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRNIVIKELERT
AVDYFQKVPVSKLIFSDYTPIHFEKITLPNGTVYTEKSADIGGWHQGDMREAVGKALVSTGINNANLGIVASSGYSQQYN
RLTNHITAHTNIGYYNNGVVVHGGSGGGGIVTLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANF
DWKRSPQSNIRPDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINNDYMVWDELKN
IYVYKGTNFKVPIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLEKPRSESSLKGWQYVKDVNYLDRVNTHWHT
MLVNRKEEKICRFSYLSPKGKKFEFLGYEDIENKICTGGRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIG
ESKICSLKMSGTVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESISIPNYRIEKN
QSNKIHLNISREKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEHGYTSYEPKLPSGWFKHYDNFEPKNEINHE
LGKMRVNDNDEYICRFNFSDSDREMKFVGYVSQLSESKYICTGGSEIYYKKNEINIELSSKENDFEWLSVRDKNLVGSKI
EFDNNKTLCVLDNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH
|
|
