Name : unnamed
Accession : ABR13362.1
PAI name : PAGI-5
PAI accession : EF611301
Strain : Pseudomonas aeruginosa B136-33
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : COG: type IV secretory pathway, VirB4 components
Homologs in the searched genomes : 140 hits ( 140 protein-level )
Publication :
-Battle,S.E., Meyer,F. and Hauser,A.R., "Genomic Islands of Pseudomonas aeruginosa", Unpublished.
-Battle,S.E., Meyer,F. and Hauser,A.R., "Direct Submission", Submitted (15-MAY-2007) Department of Microbiology/Immunology, Northwestern University Feinberg School of Medicine, 303 E. Chicago Ave, Chicago, IL 60611, USA.
-Battle,S.E., Meyer,F., Rello,J., Kung,V.L. and Hauser,A.R., "Hybrid pathogenicity island PAGI-5 contributes to the highly virulent phenotype of a Pseudomonas aeruginosa isolate in mammals", J. Bacteriol. 190 (21), 7130-7140 (2008) PUBMED 18757543.
| DNA sequence : | |
ATGGGTATCCCTTTACCCAACACCGGGAGCAAGAATGGCGCCACGCAGGCTGAAGCGTCACGCCTCTACGATCACGACCC
ATCGTTCGTCGACCTGCTGCCCTGGGCCGAGTACCTGCCCGACGAACAGGTGATGCTCCTGGAAGATGGACGTTCGCGTG
CCGTCTTCTTCGAGCTGGTGCCCTTGGGCACCGAGGGTCGCGATCCCAATTGGATGCAGAACGCCCGGGACGCATTGAAA
GAAGCCCTGCAGAACTCCTTCGACGAGCACGAAACCTCGCCCTGGATCGTCCAGTTCTACGCCCAGGACGAGATCAGCTG
GGACAATTTCCAGGAGCAGTTGAGGCAGTACGTCCATCCTCGAGCGCGAGGATCAGCCTTCAGCGAGATGTACCTGGCGC
TCATGAAGCATCACCTGGAGGGCATTTCGAAGCCGGGCGGACTGTTCGTCGACACCGCCGTCAGCAAGCTGCCCTGGCGA
GGACAACAGCGGCGCGTGCGGATGGTCGTCTACCGCCGGATCCGCAAGGCGGATGCGCAGATTCGCGGACAGGACCCGGC
GGCGTACCTGAAGTCCATCTGCGAGCGTATCCAAGGCGGCCTGGCGAACGCCGGCATCGTCGCTTCGCGCATGGGCGGAC
AGGAGATCAGGAACTGGTTGATCCGCTGGTTCAACCCGCACCCGGATCACCTCGGCAAGACCGATGCGGATCTACGTCGC
TTCTACGAACTGGTATGCCGGCCGGACGAACCGATCCTGCAGGATGACTTGCCGCTGGCCGACGGCACCGACTTCTCCCA
GAACCTGTTCTATCGGCAGCCTGTTTCCGATGCCACCCAGGGCGTATGGCTGTTCGATGCCATGCCACACCGAGTGATCG
TGGTCGACCAGTTGAACAAGGCGCCGCTGACAGGGCATTTCACCGGCGAGACGCTCAAGGGTGATGGCCTGAACGCCCTG
TTCGATCGCATGCCCGAGGATACGCTGCTGTGTATCACCATGGTGGTGACGCCGCAGGACATGCTGGAAGGGCATCTGCA
GCAGCTCTCGAAAAAGGCCGTTGGTGACAACCAGGCCTCGATCCACACCCGCGAGGACGTGGCCACCGTTCGCCGCCTGA
TCGGCCGGGAGCACAAGCTCTATCGCGGTTCGATCGCTCTGTTCGTGCGCGGCCGCGACCATACCCAGTTGGAGGAGCGC
TGCATCACCCTGAGCAACGTGCTGCTCGGCGCCGGCCTGGTGCCGGTCGAACCGCAGAACGAAGTGGGACCGCTGAACAG
CTACCTGCGCTGGCTGCCCTGCAATTTCGATCCGAACGAAAAGCGAGCCCTGGAGTGGTACACCCAGATGATGTTCGCGC
AGCACATCGCCAACCTGTCGCCCATCTGGGGGCGCACCACCGGTACCGGACACCCCGGCTTCACGCTGTTCAACCGTGGC
GGCGCGCCGTTGACCTTCGACCCGTTCAACAAGCTGGACCGGCAGATGAATGCCCACGGCTTCATCTTCGGCCCAACCGG
GTCCGGCAAGTCAGCGTCCCTGACCAACCTCATCAGCCAGATGCTCGCCATGTACCTGCCACGGATGTTCGTCGCGGAAG
CGGGCAACAGCTTCGGCCTGCTGGCCGACTTCGCCAAGCGGTTTGGCCTCTCGGTCCACCGTGTCCGCCTCGCCCCGGGC
TCCGGCGTCAGCCTGGCGCCGTTCGCGGACGCCATCAAGCTGGTCGAGAGTCCCGACCAGGTGAAGGTCCTGGATGCCGA
AGACATCGAGGCCTCGGACTCGGTCCAGGGCAGCAAGGCCGACCTCGAGGACGATCAACGAGACATCCTCGGCGAGATGG
AGATCGTCGCGCGCCTGATGATCACCGGCGGCGAAGAGAAGGAAGACGCGCGCCTGACCCGTGCCGATCGCAGCGCCATC
CGCCAGGCGATTCTGGCGGCGGCCAGGACCTGCGCCGCCGCGAACCGCACGGTGCTCACCCAGGACGTGCGCGATGCGCT
CTACGAGGCCTCCAGGAGCGATGGCTCCGCGCCAGAACGGCGCGCGCGCCTGGCCGAAATGGCGGAAGCCATGCAGATGT
TCTGCATGGGCGCCGACGGCGAGATGTTCAATCGCAAAGGCACGCCCTGGCCTGAAGCCGACCTCACCGTGGTGGATTTC
GCGACTTACGCGCGCGAAGGCTACGCCGCCCAGCTCGGGATCGCCTACATCTCGCTGCTGAACACCGTAAACAACATCGC
CGAACGCGACCAATTCAAGGGCCGGCCCATCGTCAAGATCACCGATGAGGGACACATCATCACCAAGCACCCGCTGCTGC
TGCCCTACGCCATGAAGATCACCAAGATGTGGCGGAAACTGGGCGCCTGGTTCTGGCTCGCCACCCAGAACATCGACGAC
ATCCCAGCCTCCGGGGCGCCGATGCTGAACATGATCGAGTGGTGGTTGTGCCTGAACATGCCCCCAGACGAGGTAGAGAA
GATCTCCAGGTTCCGCGAGCTGTCGCCGGCGCAGAAGTCGATGATGCTCTCGGCCCGCAAGGAAAGCGGCAAATTCACCG
AGGGCGTGCTCCTGGCCAAGGGCAAGGAGTACCTCTTCCGTGTGGTTCCCCCGAGTCTCTACCTGGCCCTGGCCATGACC
GAAAACGAAGAAAAGAACCAGCGCTACAACATCATGCAAGCCACCGGCTGCGACGAGCTCGAGGCGGCCTTGCAGGTCGC
AGCGGATCTCGACAAGGCGCGCGGCCTGCCGCCCTTCCCAATTAATTTCCCAGACCAACCGGCAGTGGAGTGCCAGGACG
AATGA
|
| Protein sequence : | |
MGIPLPNTGSKNGATQAEASRLYDHDPSFVDLLPWAEYLPDEQVMLLEDGRSRAVFFELVPLGTEGRDPNWMQNARDALK
EALQNSFDEHETSPWIVQFYAQDEISWDNFQEQLRQYVHPRARGSAFSEMYLALMKHHLEGISKPGGLFVDTAVSKLPWR
GQQRRVRMVVYRRIRKADAQIRGQDPAAYLKSICERIQGGLANAGIVASRMGGQEIRNWLIRWFNPHPDHLGKTDADLRR
FYELVCRPDEPILQDDLPLADGTDFSQNLFYRQPVSDATQGVWLFDAMPHRVIVVDQLNKAPLTGHFTGETLKGDGLNAL
FDRMPEDTLLCITMVVTPQDMLEGHLQQLSKKAVGDNQASIHTREDVATVRRLIGREHKLYRGSIALFVRGRDHTQLEER
CITLSNVLLGAGLVPVEPQNEVGPLNSYLRWLPCNFDPNEKRALEWYTQMMFAQHIANLSPIWGRTTGTGHPGFTLFNRG
GAPLTFDPFNKLDRQMNAHGFIFGPTGSGKSASLTNLISQMLAMYLPRMFVAEAGNSFGLLADFAKRFGLSVHRVRLAPG
SGVSLAPFADAIKLVESPDQVKVLDAEDIEASDSVQGSKADLEDDQRDILGEMEIVARLMITGGEEKEDARLTRADRSAI
RQAILAAARTCAAANRTVLTQDVRDALYEASRSDGSAPERRARLAEMAEAMQMFCMGADGEMFNRKGTPWPEADLTVVDF
ATYAREGYAAQLGIAYISLLNTVNNIAERDQFKGRPIVKITDEGHIITKHPLLLPYAMKITKMWRKLGAWFWLATQNIDD
IPASGAPMLNMIEWWLCLNMPPDEVEKISRFRELSPAQKSMMLSARKESGKFTEGVLLAKGKEYLFRVVPPSLYLALAMT
ENEEKNQRYNIMQATGCDELEAALQVAADLDKARGLPPFPINFPDQPAVECQDE
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