Name : unnamed
Accession : ABR13352.1
PAI name : PAGI-5
PAI accession : EF611301
Strain : Pseudomonas aeruginosa B136-33
Virulence or Resistance: Not determined
Product : insertion sequence IS407 OrfB
Function : -
Note : COG: transposase and inactivated derivatives
Homologs in the searched genomes : 960 hits ( 959 protein-level, 1 DNA-level )
Publication :
-Battle,S.E., Meyer,F. and Hauser,A.R., "Genomic Islands of Pseudomonas aeruginosa", Unpublished.
-Battle,S.E., Meyer,F. and Hauser,A.R., "Direct Submission", Submitted (15-MAY-2007) Department of Microbiology/Immunology, Northwestern University Feinberg School of Medicine, 303 E. Chicago Ave, Chicago, IL 60611, USA.
-Battle,S.E., Meyer,F., Rello,J., Kung,V.L. and Hauser,A.R., "Hybrid pathogenicity island PAGI-5 contributes to the highly virulent phenotype of a Pseudomonas aeruginosa isolate in mammals", J. Bacteriol. 190 (21), 7130-7140 (2008) PUBMED 18757543.
| DNA sequence : | |
GTGCAGGTCAACCACAAGCGGATCTATCGCCTGTACCGCGCTGCCGGCTTGATGGTGAAACGGCGGCGCCGCCGCCATGG
CGTCGCGGTGGAGCGCGAACGTCTGAGTTTGCCGAGCGCACCAAACCAGGTCTGGTCGATGGACTTCGTCTTCGATGCAC
TGAGCACCGGGCGGCGGATCAAATGCCTGACGGTGGTCGATGACTTCACCAAGGAGTCGGTCGGCATCCTGGTGGAGCAC
GGTATCAGCGGCTTTCGTGTCACACGGGCGCTGGACGAGATGGCGCGGTTTCGCGGCTACCCGAAAGCGATCCGCACCGA
CCAGGGGCCCGAGTTCACCGGCAAGGCACTCGATCAATGGGCCTATCAGCGCGACATCAAGCTGAAGCTGATTCAGCCTG
GTAAGCCCACGCAGAATGCCTTCATCGAGTCGTTCAACGGTAAGTTCCGGGACGAATGCCTCAATGAGCACTGGTTCTGT
TCGCTGGCCGAAGCGAGAATCCGCATCGCGGCCTGGCGGCGGGATTACAACGAACACCGACCGCACAGCGCGATTGGCAA
TCTCACCCCGGCAGAATTTGCTGCAAGTTGGCGAACTCGCCAGCAGCAGCTGAAGCAGGAAAAATTAATATCAACCCCAG
GGCCTACTAACTAG
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| Protein sequence : | |
MQVNHKRIYRLYRAAGLMVKRRRRRHGVAVERERLSLPSAPNQVWSMDFVFDALSTGRRIKCLTVVDDFTKESVGILVEH
GISGFRVTRALDEMARFRGYPKAIRTDQGPEFTGKALDQWAYQRDIKLKLIQPGKPTQNAFIESFNGKFRDECLNEHWFC
SLAEARIRIAAWRRDYNEHRPHSAIGNLTPAEFAASWRTRQQQLKQEKLISTPGPTN
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