Name : rep
Accession : ABJ97298.1
PAI name : SaPI2
PAI accession : EF010993
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : replication initiation protein
Function : -
Note : formerly known as helicase (similar to PT1028 orf001)
Homologs in the searched genomes : 13 hits ( 13 protein-level )
Publication :
-Subedi,A. and Novick,R.P., "Direct Submission", Submitted (18-SEP-2006) Molecular Pathogenesis, Skirball Institute of Biomolecular Medicine, New York Medical Center, 540 First Avenue, New York, NY 10016, USA.
-Subedi,A., Ubeda,C., Adhikari,R.P., Penades,J.R. and Novick,R.P., "Sequence analysis reveals genetic exchanges and intraspecific spread of SaPI2, a pathogenicity island involved in menstrual toxic shock", Microbiology (Reading, Engl.) 153 (PT 10), 3235-3245 (2007) PUBMED 17906123.
| DNA sequence : | |
ATGGAAACAGGTAAAAGTGATGTACTTGATAAAATTGAAAAAATTAATAAAAAAGATAGTGCCTTACAAGAAATTATACC
AAAAGGTTATGAAATTGAACATCATCAATGCGGTATTGCCTTAAATCAACTTATACCAAGTAAAAAAGAAGGCGAGCCAG
ATAAAAAGGTTTTTATCACAAGTACAATCCCTCAAATCACTGAACGCTTTGAAGATATTGAGAGTAACGAAGTCAGCTTT
AATATGCTTTTCTATGACAATAAAACGCCAGTAAATATAGCTGTGAGTGCCGAAGAAATTTCAGATAGTCGTCAACTCTT
GAAATTGGTTAATAAAAAGCTGGATGTAACATCGTCGACATCTACTAAACTTGTTGATTATATTAATGCATCTAAACGGT
ATAATCCACCATTGAATGTTAAAGTTGCAACGCGTTTGGGGCATGTGAAAGGTTATTTTATTTATCCTTATCAAGAAGTG
ATGAAAGACAGCAATATCAAGTTGTTTAGTAATGATAAAGGATTTCAAAAGTTAATAGACTCTTTTCAAAGCAAAGGAAC
ATTAGAAGGTTACTCTAAAAAAGTGTTCGGTCAAATAAAAGATCTACCAATGGTAATGGTTATGTTATATGCCTCTTTAG
GTTCGGTTTTATTAAGAGAATTTGGATTACAGCCCTTTATTGTAGAAATATCAGGTAGTACATCTACAGGTAAAACATTC
ACACTCAACTTAGTATCAAGTGTTTGGGGAACGAGCGACCTTATCACGACATGGAGTTCTACTCAAAATAGTATTGAATC
GATGGCATCATTTTTGAACTCATTTCCAATGTTTAAAGATGATACACGTAATACACATCCTAAGTTTGTTACCAGTGCCA
CATATAACTTTTCTAGTGGTGAAAGTAAATCAAGAAGTAATATTAATTTAACACTAAACGCTAAAAAAGAATGGCGAAAT
ATTTTAATTTCTACTGGTGAATCATCTATCGCAAATATGGCTGATGAAAAAGCGGGTGTATCAGCACGTGTAGTTACACT
ACAAGATCCACCATATCCAGATAATTTTGATTTTACCACATTAGACAAATCGTTTAGGGAGAACTATGGAACGTTAGGGT
TGGCATTTATTAAACAATATGAGTCTAAAAAAGACGTGTATAAGAACGCTTTTGAGAGCTATCAACGGTATTTTAATCAA
AAAGGTAGTAATGAAATCATGCAACGTTTAGGACGTGCCTTTGCGTTACTACAAGTTACCGGTGAGGTTTTGAATGATAT
TGATGGGTTTGAACATGACCATTTTAAAATTATCGAACAAGCCTATGACAGCATGGTTAAAAACAATAAGACGATTGATA
AACCTAAGCAACTGTTAGAGGAACTATTACAATATTTAGATGCAAATAGAAATAATATCGCTGGTGATGGCTATAGTTCA
GTCAAAAATGGTGACATCAAAGCTATATATAAACGTGATTATTTATGTATATTAGGTCAAACTGTACACGATAAATTAGG
TCATGAAATGCAGACTATAACAGGTCAATGGGGCAAAAAAGGATATTTAATTAAAGGTGAAAAAGATCGCTTGCAAAAAA
AGGTGAGTCACAAAAACATTAAGTATAGAGGATTTGCTATAAACAAAGAAATGCTTGAAGAATTAGGATTTGATTTCTCG
AATTCTCATAATCCTTATTCAGATTATTAA
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| Protein sequence : | |
METGKSDVLDKIEKINKKDSALQEIIPKGYEIEHHQCGIALNQLIPSKKEGEPDKKVFITSTIPQITERFEDIESNEVSF
NMLFYDNKTPVNIAVSAEEISDSRQLLKLVNKKLDVTSSTSTKLVDYINASKRYNPPLNVKVATRLGHVKGYFIYPYQEV
MKDSNIKLFSNDKGFQKLIDSFQSKGTLEGYSKKVFGQIKDLPMVMVMLYASLGSVLLREFGLQPFIVEISGSTSTGKTF
TLNLVSSVWGTSDLITTWSSTQNSIESMASFLNSFPMFKDDTRNTHPKFVTSATYNFSSGESKSRSNINLTLNAKKEWRN
ILISTGESSIANMADEKAGVSARVVTLQDPPYPDNFDFTTLDKSFRENYGTLGLAFIKQYESKKDVYKNAFESYQRYFNQ
KGSNEIMQRLGRAFALLQVTGEVLNDIDGFEHDHFKIIEQAYDSMVKNNKTIDKPKQLLEELLQYLDANRNNIAGDGYSS
VKNGDIKAIYKRDYLCILGQTVHDKLGHEMQTITGQWGKKGYLIKGEKDRLQKKVSHKNIKYRGFAINKEMLEELGFDFS
NSHNPYSDY
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