PAI Gene Information


Name : hrpRS
Accession : ABA47311.1
PAI name :
PAI accession : DQ168848
Strain :
Virulence or Resistance: Virulence
Product : HrpRS
Function : -
Note : Pcich-83-1-PAI-R2-ORF51
Homologs in the searched genomes :   62 hits    ( 62 protein-level )  
Publication :
    -Araki,H., Tian,D., Goss,E.M., Jakob,K., Halldorsdottir,S.S., Kreitman,M. and Bergelson,J., "Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis", Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5887-5892 (2006) PUBMED 16581904.

    -Araki,H., Tian,D., Goss,E.M., Jakob,K., Kreitman,M. and Bergelson,J., "Direct Submission", Submitted (16-AUG-2005) Ecology & Evolution, University of Chicago, 1101 E. 57th Street, Chicago, IL 60637, USA.


DNA sequence : 
ATGGATGAGGGCTTTATGAATACTGACTCTTCGCAGATGGAGCATGAGGTCCTCGATATCTTTGGCACGCTGCAGTCGTT
TATCCGCAAGGCGGCTCCGCTCAACGTCGACATGGTGCTGGAGGGGGAGACGGGCACCGGCAAGGACACCCTGGCACGCC
GAATTCACCAGCTGTCGGGTCGCGAAGGTCCGCTGGTCGCACTCAACTGTGCCGCCGTGCCCGAGCAACTGGCCGAGAGT
GAGCTTTTCGGGGTCATGGCAGGTGCATACACCGGCGCATCCAAGTCGCGGGCAGGCTATATAGAAGCGTCCCACAACGG
GACGCTCTATCTGGATGAAATCGACAGCATGCCGCTGTTGCTCCAGGCCAAGCTGCTGCGCGTGCTGGAAATGCGCGGAA
TAGAGCGCCTGGGGTCGACGCGCTTCGTGCCGCTGAACCTGCGGGTGATCGTCGCGACACAGACGCCGCTGGAAAAACTG
GTAGAGGAGGGCAAGTTTCGACGCGATCTGTTTTTTCGCCTGAACGTCATCAAGATCCAGTTGCCTACCCTGCGTTCACG
TCTGGACCATCTTCCTTCGTTGTTCGAGCGTTTCGTCATGGAAACCGCTCACAAGCACCATCAACCGATTCCCCAGCGCG
ATCCGTCAGTGCTCAATCGTCTGCTCAGCCACCGCTGGCCCGGCAATATCCGTGAACTCAAATGCGCAGCAGAGCGCTTT
GTCTTGGGCATGTCACCGCTGGGCACCGACGAAGATCCGAATCTGGAAGGTAATATTCATCTGAAGGGGTATCTTCGCCA
GTTCGAAAAAGCTCTCATTCAGGATTGTCTGTCGCGTCATCCCAAGTGTATCGAGTCTGTGATCAGTGAACTGGGCATCC
CCCGACGCACCCTTTATCACCGCATGAAAAGTCTCAGCATCAACTCCCCGGAGCCATAG

Protein sequence : 
MDEGFMNTDSSQMEHEVLDIFGTLQSFIRKAAPLNVDMVLEGETGTGKDTLARRIHQLSGREGPLVALNCAAVPEQLAES
ELFGVMAGAYTGASKSRAGYIEASHNGTLYLDEIDSMPLLLQAKLLRVLEMRGIERLGSTRFVPLNLRVIVATQTPLEKL
VEEGKFRRDLFFRLNVIKIQLPTLRSRLDHLPSLFERFVMETAHKHHQPIPQRDPSVLNRLLSHRWPGNIRELKCAAERF
VLGMSPLGTDEDPNLEGNIHLKGYLRQFEKALIQDCLSRHPKCIESVISELGIPRRTLYHRMKSLSINSPEP