Name : hrcU
Accession : ABA47282.1
PAI name :
PAI accession : DQ168848
Strain :
Virulence or Resistance: Virulence
Product : HrcU
Function : -
Note : Pcich-83-1-PAI-R2-ORF21
Homologs in the searched genomes : 24 hits ( 24 protein-level )
Publication :
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Halldorsdottir,S.S., Kreitman,M. and Bergelson,J., "Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis", Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5887-5892 (2006) PUBMED 16581904.
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Kreitman,M. and Bergelson,J., "Direct Submission", Submitted (16-AUG-2005) Ecology & Evolution, University of Chicago, 1101 E. 57th Street, Chicago, IL 60637, USA.
| DNA sequence : | |
ATGAGCGAAAAAACCGAAGAACCCACGCAGAAAAAGCTCGATGACGCACGCAAGAAAGGTCAGGTCGGGCAAAGCCAGGA
TATTCCCAAGCTGTTCATTTTCGCGGCCCTGATCGAAATGATCCTGGCCATGGTGGACTCCGGCATGGAGCGTCTCAAGG
AACTGATGGTACTGCCCATCATGGAGCTGGATCGGCCCTTCGGCGCAGCCCTTGGCGAGGTGATGACCAAGGCAGGCCTG
GAGTTGCTGCTGTTCATGCTCCCGGTACTGGGTGTTGCCGCAATCATGCGGCTGGCCGGCGGCTGGGTCCAGTTCGGGCC
GCTGTTCGCCACCGAAGCCCTGAAGCTGGACTTCGAGCGGCTCAACCCCATCAACCAGTTCCAGCAGATGTTCTCTTCGC
GCCAGTTGTTCAACCTGTTCAACAGCCTGTGCAAGGCGGTGATGATCACCCTCGTGCTGTATTGGCTCCTGCCACCGTCA
CTGGGCGACCTGATCGGCCTTGCCCAGACGGATCTGGACAGCTACTGGAAAGCACTGGTCGACCTGTTCAGACGCCTGTC
ACGCATCTGTCTGGGCCTGCTGCTGGTGCTGGCCATCGTCGACTTTGCCCTGCAGAAATACTTCTTCATCAAGGGTCAGC
GCATGAGCCATGAAGATATCCGCAAGGAATACAAAGAGTCCGAAGGCGACCCGCACATGAAGTCCCACCGCAAGTCCCTG
GCCCGGGAAATCTCCCAGCAACCCGGCTCTGCCGCCCCGGCCAAAGCGCCGGTGGAAGACGCCGATATGCTGCTGGTCAA
CCCGACCCACTTTGCCGTGGCCCTTTTCTATCGTCCCGAACAGACGCCGCTGCCGCGCATCATTTGCAAGGGGCGCGATG
CCGATGCCCGGGAACTCATCGAGCGCGCCCGCAAGGCAGGCGTGCCGGTGGTGCGCTTCGTCTGGCTGGCACGAACGCTG
TATCGCGAAAACGTGGGCCAGTTCATTCCCCGGGCCACTTTGCAGGCAGTGGCGCAGGTTTATCGTCTGCTGCGTGAAAT
CGATGAACGGGAAAAAGGGGACGTGATCGAGATGCCGCACTATTAA
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| Protein sequence : | |
MSEKTEEPTQKKLDDARKKGQVGQSQDIPKLFIFAALIEMILAMVDSGMERLKELMVLPIMELDRPFGAALGEVMTKAGL
ELLLFMLPVLGVAAIMRLAGGWVQFGPLFATEALKLDFERLNPINQFQQMFSSRQLFNLFNSLCKAVMITLVLYWLLPPS
LGDLIGLAQTDLDSYWKALVDLFRRLSRICLGLLLVLAIVDFALQKYFFIKGQRMSHEDIRKEYKESEGDPHMKSHRKSL
AREISQQPGSAAPAKAPVEDADMLLVNPTHFAVALFYRPEQTPLPRIICKGRDADARELIERARKAGVPVVRFVWLARTL
YRENVGQFIPRATLQAVAQVYRLLREIDEREKGDVIEMPHY
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