Name : hrcV
Accession : ABA47273.1
PAI name :
PAI accession : DQ168848
Strain :
Virulence or Resistance: Virulence
Product : HrcV
Function : -
Note : Pcich-83-1-PAI-R2-ORF12
Homologs in the searched genomes : 72 hits ( 72 protein-level )
Publication :
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Halldorsdottir,S.S., Kreitman,M. and Bergelson,J., "Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis", Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5887-5892 (2006) PUBMED 16581904.
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Kreitman,M. and Bergelson,J., "Direct Submission", Submitted (16-AUG-2005) Ecology & Evolution, University of Chicago, 1101 E. 57th Street, Chicago, IL 60637, USA.
| DNA sequence : | |
ATGATCCGCATCATCCATGCACTCAACAACCTCGCGCTGGCGGTGATGAGGCGCACGGAAATCGTCGGCGCGATCATGGT
CATGGCCATCGTGTTCATGATGATCCTGCCCTTGCCTACCGCACTGGTGGACGTGCTGATCGCGCTGAACATCTGTATTT
CTTCACTGCTTATCGTGCTGGCGATGTATCTGCCGCGCCCGCTGGCATTCTCGACCTTTCCGGCGGTACTGCTGCTGACC
ACCATGTTTCGCCTGGCACTGTCGATTGCCACTACCCGTCTGATTCTGCTGCAACAGGATGCCGGTCATATCGTCGAAGC
ATTCGGCAGCTTCGTGGTTGGCGGCAACCTGGCGGTGGGTCTGGTGATCTTCCTGATCCTGACCATCGTCAACTTTCTGG
TGATCACCAAGGGGTCGGAACGGGTTGCGGAAGTGGCCGCGCGCTTCACCCTCGACGCGATGCCCGGCAAGCAGATGTCC
ATCGACAGCGACCTGCGCGCCAACCTGATCAACGTTCGCGAAGCCCGGCATCGTCGCGAGCAGCTGTCCAAGGAAAGCCA
GCTGTTCGGTGCGATGGACGGCGCGATGAAGTTCGTGAAGGGTGATGCCATCGCCGGTCTGGTGATCGTGTTCATCAACC
TCATCGGTGGTTTTTCCATCGGCGTGATGCAGCACGGCATGGAAGCCGGTGACGCCATGCACCTGTATTCGGTGCTGACC
ATCGGTGACGGCCTGATCGCCCAGATCCCTGCGCTGCTGATCTCCCTGACCGCGGGCATGATCATCACCCGCGTGGCTCC
GGACAGCCAGACCGCCGACGCCAACATCGGTCATGAAATCGCCGAACAGCTCACCAGCCAGCCAAAGGCCTGGGTGTTCG
CCTCTCTCGGGATGATGGGGTTCGGCCTGATTCCCGGGATGCCGACCATTGTTTTTGCGTGCATCAGTCTGCTGTGCCTG
TTCAGCGGCCTGATCCAGTTGTGGCGGATTCGCCAGAAGGAGCTTTACCAGAATCAGATCGGTGCCGCCGGCAATGCCTC
GCCTGAACTCAACGGTCGCGAGGATATACGCCGCTTCAACCCGTCGCGGGCCTATCTGCTGCAGTTTCACCCCAGCCACC
AGGGGGTGATGGAACTCGACATGCTGATTCAAGGCATTCGCCAGCGCCGCAACACACTGGTTCACAACTTCGGCCTGACG
CTGCCCTCCTTCGATATAGAGTTCGTGGAAAGTTGTGAAATCGACGAATTCCGCTTCTGCGTCTATGAAGTGCCGTTTGT
TCGCGCCACCATTTCCCTGACCCACGTGGCCGTCGATATTCGTGATGTCGAGGAAGGCCAGCCCGGCTACCCCGGCCGGA
TCGACCGCGATGAAGCCCAGTGGATGTGGGTCGATGCGAACGATCCGCTGTTCCAGGACGAGGATATCGTCGGCATACGG
CCTCATGAGCTGATCCTTGAACGCATGAGCCGCGCCTTCCAGGCCACCGGCCCGCAATTCATCGGCCTTCAGGAAAGCAA
GGCGATCCTCAGCTGGCTGGAATCCGAACAGCCGGAGCTGGCCCAGGAGCTGCAACGCACCTTGCCTCTGGCGCGCTTTG
CCGCAGTGCTGCAACGTCTTTCTGCCGAACTGGTTTCGCTGCGCTCGGTCAGGCCGATTGCCGAAACCCTGATCGAACAA
GGTCAGCATGAGCGCGATCTCAACGCCCTGACCGACTATGTACGCATCGCCCTCAAGGCGCAGATCTGCCATCAACACAG
TGAAGAAAACACCCTCAATACCTGGCTGGTGACGCCGGAAACGGAAGTGTTGCTGCGCGATGCCCTGCGCCAGACCCAGA
ACGAATCCTACTTTGCCCTTGAACCCGAGCTGGGCAGTGCGCTGCTGGAACAGTTGCGCGAAGCCTTTGCCCTGCAATCG
AACCCGCCGTCCAGCCCCAAGGCGGTACTGCTGGTTGCCCAGGACCTGCGCAGCCCCTTGCACAGCCTGCTGGCAGATGA
GTTCAACCACGTACCCGTGCTGTCTTTCGCCGAGTTGTTATCCACGGTGCAAGTCAAGGTTCTGGGTCGCATCGACCTGG
ATGAAGCACAAGCCCTGATGGCCTGA
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| Protein sequence : | |
MIRIIHALNNLALAVMRRTEIVGAIMVMAIVFMMILPLPTALVDVLIALNICISSLLIVLAMYLPRPLAFSTFPAVLLLT
TMFRLALSIATTRLILLQQDAGHIVEAFGSFVVGGNLAVGLVIFLILTIVNFLVITKGSERVAEVAARFTLDAMPGKQMS
IDSDLRANLINVREARHRREQLSKESQLFGAMDGAMKFVKGDAIAGLVIVFINLIGGFSIGVMQHGMEAGDAMHLYSVLT
IGDGLIAQIPALLISLTAGMIITRVAPDSQTADANIGHEIAEQLTSQPKAWVFASLGMMGFGLIPGMPTIVFACISLLCL
FSGLIQLWRIRQKELYQNQIGAAGNASPELNGREDIRRFNPSRAYLLQFHPSHQGVMELDMLIQGIRQRRNTLVHNFGLT
LPSFDIEFVESCEIDEFRFCVYEVPFVRATISLTHVAVDIRDVEEGQPGYPGRIDRDEAQWMWVDANDPLFQDEDIVGIR
PHELILERMSRAFQATGPQFIGLQESKAILSWLESEQPELAQELQRTLPLARFAAVLQRLSAELVSLRSVRPIAETLIEQ
GQHERDLNALTDYVRIALKAQICHQHSEENTLNTWLVTPETEVLLRDALRQTQNESYFALEPELGSALLEQLREAFALQS
NPPSSPKAVLLVAQDLRSPLHSLLADEFNHVPVLSFAELLSTVQVKVLGRIDLDEAQALMA
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