Name : ORF_31 (ORF_31)
Accession : AAZ04441.1
PAI name : PAI I APEC-O1
PAI accession : DQ095216
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : conserved hypothetical protein
Function : -
Note : similar to ybdN, NP_757057
Homologs in the searched genomes : 182 hits ( 181 protein-level, 1 DNA-level )
Publication :
-Kariyawasam,S., Johnson,T.J. and Nolan,L.K., "The pap Operon of Avian Pathogenic Escherichia coli Strain O1:K1 Is Located on a Novel Pathogenicity Island", Infect. Immun. 74 (1), 744-749 (2006) PUBMED 16369033.
-Kariyawasam,S., Johnson,T.J. and Nolan,L.K., "Direct Submission", Submitted (15-JUN-2005) Veterinary Microbiology and Preventive Medicine, Iowa State University, 1802 Elwood Drive, VMRI 2, Ames, IA 50011, USA.
| DNA sequence : | |
ATGAATGATAATTTATTAACGGAGAAAGTCCTTACTGGAGAGAATGTTCTGCGTGCAGCAATTGCTCGTATTGAGTGGAT
TTTTGAAACATTTCCATCAGTTTGTCTCTCTTTTTCCGGGGGTAAAGATTCCACCGTGCTTTTCCATCTTTTGGCTGATG
TGGCCCGCAGGAAAAAACGTCGTTTCTCTGTACTGTTTATTGACTGGGAGGCTCAGTACCAGTGCACCATTGAACATATT
CAGAAGATGCGGGAAATGTACCATGATGTGACGGAAACCTTTTACTGGGTGGCACTTCCCCTGACCACGGTAAACGGCGT
CTCGCAGTTTCAGCCGGAGTGGATATGCTGGGAGCCAGGAGTGACCTGGGTTCGCCAGCCACCGGAAGAGGCCATTACAG
ACATGACGTATTTCCCATTTTATCGGTATGCCATGACGTTTGAAGAATTTGTTCCGGCATTTTCTTCCTGGTTTGCAGAC
AATAAATGTGGTGTGGCAGTACTGACCGGTGTCCGTGCGGATGAGTCCCTTAACCGGTTCATGGGACTGGTGTCCCAGCG
CAAACTGAGATACGCCGATGATAAGCCCTGGACCACGGCATCGCCTGAAGGGTTTTACTACACCATGTATCCACTGTATG
ACTGGAAAACTCGTGATATCTGGATATATCACACCAGAACCCGTGCCATCTACAATCCCCTGTATGACCTGATGTACCGT
GCCGGCGTACCGTTACGCAACATGCGTGTCTGTGAACCTTTTGGTCCTGAACAACGTAAGGGACTGTGGCTTTACCATGT
TCTGGAGCCGGATACCTGGGCCAGGATGTGTGAGCGGGTATCAGGGGCTGCCAGCGGGGCACTTTATGCCAATGAAAGCG
GTGCTTATTTTGCCCTGCGCAAGCGCATATCAAAACCAGCCCATCATACCTGGCGCAGCTACGCGATGTTTCTGCTGGAT
GTGATGCCGGAAAGAACAGCAGAACATTACCGCAACAAGATAGCTGTCTATCTGCGCTGGTATCAGACGCGGGGCTTCCC
GGATGACATTCCCGATGAACAGGAGAATGACCTGGGCTGCCGGGATATCCCGTCCTGGCGACGTATCTGTAAGACTCTTA
TAAAGAATGATTTCTGGTGCCGGACGCTGTCCTTCAGCCCGAACAAACCCCGGCACTATGAACGTTACCTGCAGCGTATG
AAGGAAAGGAGGAATGAATGGGGGATTCTGTGA
|
| Protein sequence : | |
MNDNLLTEKVLTGENVLRAAIARIEWIFETFPSVCLSFSGGKDSTVLFHLLADVARRKKRRFSVLFIDWEAQYQCTIEHI
QKMREMYHDVTETFYWVALPLTTVNGVSQFQPEWICWEPGVTWVRQPPEEAITDMTYFPFYRYAMTFEEFVPAFSSWFAD
NKCGVAVLTGVRADESLNRFMGLVSQRKLRYADDKPWTTASPEGFYYTMYPLYDWKTRDIWIYHTRTRAIYNPLYDLMYR
AGVPLRNMRVCEPFGPEQRKGLWLYHVLEPDTWARMCERVSGAASGALYANESGAYFALRKRISKPAHHTWRSYAMFLLD
VMPERTAEHYRNKIAVYLRWYQTRGFPDDIPDEQENDLGCRDIPSWRRICKTLIKNDFWCRTLSFSPNKPRHYERYLQRM
KERRNEWGIL
|
|
