Name : hrcN
Accession : AAT96339.1
PAI name :
PAI accession : AY597283
Strain :
Virulence or Resistance: Virulence
Product : HrcN
Function : -
Note : PAI-R2-ORF12
Homologs in the searched genomes : 1401 hits ( 1401 protein-level )
Publication :
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Halldorsdottir,S.S., Kreitman,M. and Bergelson,J., "Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis", Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5887-5892 (2006) PUBMED 16581904.
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Kreitman,M. and Bergelson,J., "Direct Submission", Submitted (12-APR-2004) Ecology and Evolution, University of Chicago, 1101 E. 57th St., Chicago, IL 60637, USA.
| DNA sequence : | |
ATGGACGCCGCGCTGGCACGTCTCGAGTCCTGGCGTCAGGCCCAGAGCGAGCGTTTGTCGCACTGCGCGCCGGTGCAGAT
CCGCGGCCGGATCGCTGGCGTCAACGGCATTCTGCTCAACAGCTACATGCCCCGGGCGAGAATCGGCGATCTGTGTGAAA
TCAGCCGTGCCGATGGCAGCGAGGTGATGGCGGAAATCGTCGGCTTCGACCGGCAGCACACGTTACTGGCGGCGCTGGGA
CCGCTGGACGGCATCGCGATAGGCGCATCGGTCAGACCGCTGTTTCAACCGCACAGTCTGGTGGTCGGCGAGTTTCTTCT
GGGCGCGGTCCTCGATGGCTTCGGCCGCTCGCTCAGTGGCGACGGCCCCTCAGCCTTTGCCCTGTCCGGCGCCGTGGGTG
CGCAACCGGTGATCCGCGATGCCCCGCCCGCCACCGAGCGCCCCAGAATCGATGCACCGCTGTCCACCGGGCTGCGCTCC
ATTGACGGCCTGCTGACGCTGGGTGAAGGACAGCGCGTCGGTATCTTCGCCGGTGCCGGGTGCGGCAAGACCACCCTGCT
GGCGGAAATGGCGCGTAACACGCCGTGCGAGGCCATCGTGTTCGGCCTGATCGGCGAGCGCGGTCGTGAACTGCGCGAAT
TCCTCGACCATGAACTGGACGAAGAACTGCGCCAGCGCACCGTGCTGGTGTGCTCCACCTCGGACCGCAGCAGCATGGAG
CGCGCCCGGGCAGCGTTCACCGCCACAGCGATTGCCGAAGGCTTTCGCCAGCAGGGCAAATCGACCCTGCTGATCATCGA
CTCCCTGACCCGTTTCGCCCGGGCGCAACGGGAGATCGGTCTGGCCAGCGGCGAACCGGCCGGACGCGGCGGCCTGCCGC
CCTCGGTCTACAGCCTGCTGCCACGCCTCGTGGAACGCGCCGGCCGCACCCACGATGCGGCGATCACGGCGCTGTATTCG
GTCCTGATCGAGCAGGACTCGATGAACGATCCCATCGCCGACGAGGTGCGCTCGTTGCTCGACGGCCACATCGTGCTTTC
GCGCAAGCTGGCCGAGCGCGGCCATTACCCGGCCGTGGACATTCTCACCAGTCTCAGCCGGACCATGAGCAATGTGGTGG
GAACCGAACAGGTCCACGGTGCCACACAGGTACGCAGACTGATGGCGGCTTATCAGCAGGTAGAAATGCTGATCAAGCTG
GGCGAGTACCAGCCGGGTAACGATCCGCTGACCGATTTTGCCGTGCAGTCCCGTGACCAGATCATGGGCTTTCTTCAGCA
GTCGCTGCGTGACCCGGTGTCGCTCGATGAAACCCTGGACCACCTCATACAGGTAACTGCCGATGTCCCACGATGA
|
| Protein sequence : | |
MDAALARLESWRQAQSERLSHCAPVQIRGRIAGVNGILLNSYMPRARIGDLCEISRADGSEVMAEIVGFDRQHTLLAALG
PLDGIAIGASVRPLFQPHSLVVGEFLLGAVLDGFGRSLSGDGPSAFALSGAVGAQPVIRDAPPATERPRIDAPLSTGLRS
IDGLLTLGEGQRVGIFAGAGCGKTTLLAEMARNTPCEAIVFGLIGERGRELREFLDHELDEELRQRTVLVCSTSDRSSME
RARAAFTATAIAEGFRQQGKSTLLIIDSLTRFARAQREIGLASGEPAGRGGLPPSVYSLLPRLVERAGRTHDAAITALYS
VLIEQDSMNDPIADEVRSLLDGHIVLSRKLAERGHYPAVDILTSLSRTMSNVVGTEQVHGATQVRRLMAAYQQVEMLIKL
GEYQPGNDPLTDFAVQSRDQIMGFLQQSLRDPVSLDETLDHLIQVTADVPR
|
|
