Name : hrcV
Accession : AAT96337.1
PAI name :
PAI accession : AY597283
Strain :
Virulence or Resistance: Virulence
Product : HrcV
Function : -
Note : PAI-R2-ORF10
Homologs in the searched genomes : 70 hits ( 70 protein-level )
Publication :
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Halldorsdottir,S.S., Kreitman,M. and Bergelson,J., "Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis", Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5887-5892 (2006) PUBMED 16581904.
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Kreitman,M. and Bergelson,J., "Direct Submission", Submitted (12-APR-2004) Ecology and Evolution, University of Chicago, 1101 E. 57th St., Chicago, IL 60637, USA.
| DNA sequence : | |
ATGACCGGCATTATTCACCTGCTCAACCGCCTGGCACTGGCGGTCATGGGCCGCACCGAAATCGTCGGCGCAGTCATGGT
CATGGCCATCGTCTTCATGATGATTCTGCCCTTGCCGACCTGGCTGGTGGACGTGCTGATCGCACTGAATATCTGTATCT
CATCGCTGCTGATCGTGCTGGCGATGTACCTGCCACGTCCGCTGGCCTTCTCGACCTTTCCGGCAGTGCTGCTGCTGACC
ACCATGTTTCGCCTTTCGCTGTCGATTGCAACGACCCGTCTGATTCTGCTGCAACAGGACGCCGGACACATCGTTGAAGC
CTTCGGCAGCTTCGTGGTGGGCGGCAACCTGGCGGTCGGTCTGGTGATCTTCCTGATTCTGACCATCGTCAACTTTCTGG
TCATCACCAAGGGCTCGGAACGGGTTGCGGAGGTGGCTGCGCGCTTCACGCTGGACGCGATGCCCGGCAAACAGATGTCC
ATCGACAGCGACCTGCGGGCCAACCTGATTAACGTGCGCGAGGCCCGGCACCGCCGTGAACAGTTGTCCAAGGAAAGCCA
GCTGTTTGGCGCCATGGACGGCGCGATGAAATTCGTCAAGGGCGACGCCATTGCCGGTCTTGTCATCGTGTTTATCAACC
TGATCGGCGGCTTCTCCATCGGCGTACTGCAGAACGGTATGGAAGCCGGCGATGCCATGCACCTGTATTCGGTACTGACC
ATCGGCGACGGTCTGATTGCACAGATCCCGGCCCTGCTGATCTCGCTGACAGCGGGCATGATCATTACCCGCGTCGCACC
CGACAGTCAGACGGCCGACGCCAACATCGGTCATGAAATTGCCGAGCAGCTCACCAGCCAGCCCAAGGCATGGGTCTTTT
CGTCCATCGGCATGATGGGTTTCGGGCTGATTCCGGGCATGCCGACTGTGGTTTTCGCCTGTATCGCTCTGCTGTGTCTG
TTCAGCGGCCTGATTCAGCTCTGGCGCATACGCCAGAAAGAGCTGCATCAGGACAGCATCGGTGCAGCCAGCAAAGGCGC
GCCGGAGCTGAACGGACGCGAGGACATCCGGCGTTTCAATCCGTCACGGGCCTACCTGCTGCAATGCCATTCCAGCCATC
AGGGCACGGTAGAGCTCGACAGGCTGATACATGGCATTCGTCAGCGTCGCAACACACTGGTGCACAACTTTGGCCTGACA
CTGCCCTCATTCGACATGGAGTTCGCCGATCATTTCGAGCCCGACGAATTCCGCTTCTGCGTCTACGAAGTGCCATTCAT
TCGCGCCACCTTCACCAACGCGCGCGTGGCTGTCGATCATCGGGAAATCGATGAAGACGCCGGTGAGCCGGGCCGTGTCG
AACGTGATGAGACACGCTGGGTCTGGGTCGACATCGATGATCCGCTGCTCAAGGAGGAGGAGCACGCCGGGGTGTCTTCG
CTGGAGCTGATTCTGGAACGCATGAGCCGCGCCTTCCAGGCCACCGGGCCGCAATTCATCGGCCTGCAGGAGAGCAAGGC
CATCCTCAGTTGGCTGGAAAGCGAGCAGCCTGAACTGGCGCAGGAGCTGCAGCGCACCCTGCCGCTGGCGCGTTTCGCCG
CCGTTCTGCAACGTCTGTCTGCCGAACTGGTGTCCTTGCGCTCGGTCAGGCCGATTGCCGAGACCCTGATCGAGCAAGGC
CAGCACGAACGCGACCTCAATGCTCTGACCGATCACGTGCGCATCGCCCTCAAGGCCCAGATCTGCCACCAGCATTGTGA
AGAAAACACGCTGCATACCTGGCTGGTGACGCCGGAAACCGAAGTACTGCTGCGTGACTCGCTGCGCCAGACCCAGAACG
AATCCTACTTTGCTCTGGAGCCGGAACTGGGCAACGCGCTGGTCGAGCAACTGCGCGAAGCCTTCCCGCTGCAAGCCAGC
CCCAGACCCGTGCTGCTGGTGGCTCAAGACCTGCGCAGCCCTTTGCGCAGCCTGCTGACCGACCAGTTTCACCATGTTCC
CGTGCTGTCCTTCGCCGAGCTGATCCCCACGGTTCAGGTCCAGGTGCTGGGGCGGATTGACCTGCAAGAAACCTACGACC
TGATGGCCTGA
|
| Protein sequence : | |
MTGIIHLLNRLALAVMGRTEIVGAVMVMAIVFMMILPLPTWLVDVLIALNICISSLLIVLAMYLPRPLAFSTFPAVLLLT
TMFRLSLSIATTRLILLQQDAGHIVEAFGSFVVGGNLAVGLVIFLILTIVNFLVITKGSERVAEVAARFTLDAMPGKQMS
IDSDLRANLINVREARHRREQLSKESQLFGAMDGAMKFVKGDAIAGLVIVFINLIGGFSIGVLQNGMEAGDAMHLYSVLT
IGDGLIAQIPALLISLTAGMIITRVAPDSQTADANIGHEIAEQLTSQPKAWVFSSIGMMGFGLIPGMPTVVFACIALLCL
FSGLIQLWRIRQKELHQDSIGAASKGAPELNGREDIRRFNPSRAYLLQCHSSHQGTVELDRLIHGIRQRRNTLVHNFGLT
LPSFDMEFADHFEPDEFRFCVYEVPFIRATFTNARVAVDHREIDEDAGEPGRVERDETRWVWVDIDDPLLKEEEHAGVSS
LELILERMSRAFQATGPQFIGLQESKAILSWLESEQPELAQELQRTLPLARFAAVLQRLSAELVSLRSVRPIAETLIEQG
QHERDLNALTDHVRIALKAQICHQHCEENTLHTWLVTPETEVLLRDSLRQTQNESYFALEPELGNALVEQLREAFPLQAS
PRPVLLVAQDLRSPLRSLLTDQFHHVPVLSFAELIPTVQVQVLGRIDLQETYDLMA
|
|
