Name : hrcV
Accession : AAT96256.1
PAI name :
PAI accession : AY597281
Strain :
Virulence or Resistance: Virulence
Product : HrcV
Function : -
Note : PAI-R2-ORF10
Homologs in the searched genomes : 70 hits ( 70 protein-level )
Publication :
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Halldorsdottir,S.S., Kreitman,M. and Bergelson,J., "Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis", Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5887-5892 (2006) PUBMED 16581904.
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Kreitman,M. and Bergelson,J., "Direct Submission", Submitted (12-APR-2004) Ecology and Evolution, University of Chicago, 1101 E. 57th St., Chicago, IL 60637, USA.
| DNA sequence : | |
ATGAACGGCATTATTCACCTGCTCAACCGCTTGGCACTGGCGGTGATGGGCCGCACTGAAATCGTCGGCGCAGTGATGGT
CATGGCCATCGTCTTCATGATGATTCTGCCCCTGCCGACCTGGCTGGTGGACGTGCTGATCGCACTGAACATCTGCATTT
CGTCGTTGCTGATCGTGCTGGCCATGTACCTGCCGCGTCCGCTGGCCTTCTCGACCTTTCCGGCAGTGCTGCTGCTGACC
ACGATGTTTCGTCTTTCGCTGTCGATCGCCACGACCCGTCTGATCCTGCTGCAACAGGACGCCGGACACATCGTCGAAGC
CTTCGGCAGCTTCGTGGTGGGCGGCAACCTGGCGGTCGGTCTGGTGATCTTTCTGATTCTGACCATCGTCAACTTTCTGG
TCATCACCAAGGGCTCGGAACGGGTGGCCGAGGTGGCTGCGCGCTTCACGCTGGACGCCATGCCGGGCAAACAGATGTCC
ATCGACAGCGACCTGCGGGCCAACCTGATTAACGTGCGCGAAGCCCGGCACCGACGTGAACAGTTGTCCAAGGAAAGCCA
ACTGTTCGGTGCCATGGACGGCGCGATGAAGTTCGTCAAGGGCGACGCTATTGCCGGTCTGGTCATCGTGTTCATCAACC
TGATCGGCGGCTTCTCGATCGGCGTGCTGCAGAACGGCATGGAGGCCGGTGACGCGATGCACCTGTATTCGGTGCTGACC
ATCGGCGACGGTCTGATTGCACAGATTCCGGCCCTGCTGATCTCGCTGACAGCGGGCATGATCATTACCCGCGTAGCGCC
CGACAGCCAGACGGCCGACGCCAACATCGGTCATGAAATTGCCGAGCAGCTCACCAGCCAGCCCAAGGCATGGGTCTTTT
CATCCATCGGCATGATGGGGTTCGGGCTGATTCCAGGCATGCCGACGCTGGTTTTTGCCTGTATCGCCCTGCTGTGCCTG
TTCAGCGGCCTGATCCAGCTCTGGCGCATCCGCCAGAAAGAGCTGCATCAGGACAGCATCGGCGCAGCCAGCAAAGGCGC
GCCGGAACTGAACGGGCGCGAAGACATTCGCCGTTTCAATCCGTCACGGGCCTACCTGCTGCAATGCCATTCCAGCCATC
AGGGCACGGCGGAGCTCGACAGGCTGATACAGGGCATTCGCCAGCGTCGCAACACGCTGGTGCACAACTTCGGCCTGACG
CTGCCCTCGTTCGACATGGAGTTCGCCGATCACTTCGAGCCTGATGAATTCCGCTTCTGCGTCTACGAAGTGCCATTCAT
TCGCGCCACCTTCACCAACGCGCGCCTGGCGGTCGATCATCGGGAAATCGATGAGGACGCCGGTGAGCCGGGCCGTGTCG
AACGCGATGAGACTCGCTGGGTCTGGGTGGATATCGATGATCCGCTGCTCAAGGAAGAAGAGCACGCTGGTGTGTCTTCG
CTGGAGCTGATCCTGGAACGCATGAGCCGAGCCTTTCAGGCCACCGGACCGCAATTCATCGGCCTGCAGGAGAGCAAGGC
CATCCTCAGCTGGCTGGAAAGCGAGCAGCCGGAACTGGCGCAGGAGCTGCAGCGCACCTTGCCGCTGGCGCGTTTTGCCG
CCGTTCTGCAACGCCTGTCCGCCGAACTGGTGTCCTTGCGTTCGGTCAGGCCAATCGCTGAAACCCTGATCGAGCAGGGC
CAGCACGAGCGCGACCTCAACGCGCTGACCGATCACGTGCGCATCGCCCTCAAGGCCCAGATCTGTCACCAGCACTGTGA
AGAGAACACGCTGCATACCTGGCTGGTGACGCCGGAAACCGAAGTGCTGCTGCGCGACTCCCTGCGCCAGACCCAGAACG
AATCCTACTTTGCCCTGGAACCGGAGCTGGGCAACGCGCTGGTTGAGCAACTGCGCGAAGCCTTTCCGCTGCAAGCCAGC
CCCCGACCGGTCCTGCTGGTGGCGCAGGACCTGCGCAGCCCTCTGCGCAGCCTGCTGACCGACCAGTTCCACCATGTTCC
CGTGCTGTCCTTCGCCGAGCTGATCCCCACGGTTCAGGTCCAGGTGCTGGGGCGGATCGACCTGCAAGAAACCTACGACC
TGATGGCCTGA
|
| Protein sequence : | |
MNGIIHLLNRLALAVMGRTEIVGAVMVMAIVFMMILPLPTWLVDVLIALNICISSLLIVLAMYLPRPLAFSTFPAVLLLT
TMFRLSLSIATTRLILLQQDAGHIVEAFGSFVVGGNLAVGLVIFLILTIVNFLVITKGSERVAEVAARFTLDAMPGKQMS
IDSDLRANLINVREARHRREQLSKESQLFGAMDGAMKFVKGDAIAGLVIVFINLIGGFSIGVLQNGMEAGDAMHLYSVLT
IGDGLIAQIPALLISLTAGMIITRVAPDSQTADANIGHEIAEQLTSQPKAWVFSSIGMMGFGLIPGMPTLVFACIALLCL
FSGLIQLWRIRQKELHQDSIGAASKGAPELNGREDIRRFNPSRAYLLQCHSSHQGTAELDRLIQGIRQRRNTLVHNFGLT
LPSFDMEFADHFEPDEFRFCVYEVPFIRATFTNARLAVDHREIDEDAGEPGRVERDETRWVWVDIDDPLLKEEEHAGVSS
LELILERMSRAFQATGPQFIGLQESKAILSWLESEQPELAQELQRTLPLARFAAVLQRLSAELVSLRSVRPIAETLIEQG
QHERDLNALTDHVRIALKAQICHQHCEENTLHTWLVTPETEVLLRDSLRQTQNESYFALEPELGNALVEQLREAFPLQAS
PRPVLLVAQDLRSPLRSLLTDQFHHVPVLSFAELIPTVQVQVLGRIDLQETYDLMA
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