Name : unnamed
Accession : AAT96228.1
PAI name :
PAI accession : AY597278
Strain :
Virulence or Resistance: Not determined
Product : major facilitator family transporter
Function : -
Note : PAI-R1-ORF85
Homologs in the searched genomes : 827 hits ( 827 protein-level )
Publication :
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Halldorsdottir,S.S., Kreitman,M. and Bergelson,J., "Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis", Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5887-5892 (2006) PUBMED 16581904.
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Kreitman,M. and Bergelson,J., "Direct Submission", Submitted (12-APR-2004) Ecology and Evolution, University of Chicago, 1101 E. 57th St., Chicago, IL 60637, USA.
| DNA sequence : | |
ATGATAACCACGATGCCCCTCGACGCGGTCTCGACCGCCCGTGCCAATGCCTACCGCAAGACCGCCTGGCGGCTGATGCC
GTTCCTGATGCTGTGCTACCTGTGCGCTTATCTGGACCGGGTCAATGTCGGGTTTGCCAAGCTGACCATGATGAATGACC
TGGCCTTCAGCGAAGCCGTCTACGGCCTCGGCGCCGGCATGTTCTTCATCGGTTATTTCCTCTGTGAAGTACCCAGTAAC
CTGATTCTGCATCGCGTCGGCGCACGCCGTTGGATCGCGCGCATCATGATTTCCTGGGGCATCATTTCCGCCCTGTTCGC
CTTCGTCGAAACCGAATGGCAGTTCTACGCCCTGCGCTTTCTGCTCGGTGTGGCAGAAGCCGGTCTGGCACCGGGTCTGC
TGCTTTACCTCACCTACTGGTTCCCGTCCTATCGCCGTGCGCGCATGACGGTGCTGTGGTTCATCGCCATTCCATTGTCC
GGAATGATCGGCGGGCCGCTGTCGGGCTACATCATGGGCACCTTCGCAGGCTTTCATGGCTGGGCAGGCTGGCAGTGGAT
GTTTGTCATCGAGGCCATTCCCACGGTGATTGTCGGCCTGATGGTATTGGCGTACCTGAAAGACGGCGTGCATCAGGCAA
CCTGGCTCACCGATGACGAAAAAGAGCTGATCAAAAAGGAACTGGCCGAAGACAACAGCCAGAAGGTCGTGCATGCCTCG
GTGGGTGAGTTCGTTCGCGACCGCCGTCTGTGGCTGCTGGCCTGTATCTACTTCTGCGTGGTGATGGGTCAGTACGCAAT
CACCTTCTGGCTGCCAACGCTGATCCGCAACGCCGGGCTGGCGGATCCGCTGCACATCGGCCTGATGACCAGCGTGCCGT
ACCTGTGCGCCATCGTCGCCATGTTGTTGATGGGTCGCAGCGGCGACAAGCACCGCGAGCGCCGCTGGCATCTGGTGCTG
CCGATGATCGCCGGTGCGCTGGGCCTGAGCCTGGCGGCGGTGTTCGGCAACAGCCTGCTGCTCTCGGTACTGAGCCTGTG
CCTGGCAGCAGCCGGCGTGCTTTCGGCGTCGTCCCTGTTCTGGATGCTGCCCACCACACTGCTGGGCGGCGTGTCCGCAG
CGGCGGGCATTGCCGGCATCAACAGCTTCGCCAACCTCGCGGGTTTCTGCTCGCCTTACCTGATCGGCTGGATCACGACC
ACCACCGGCTCCAGCGCCATCGGCATGTACTTGATCACCGGCGTGCTGTTCATCGGCGCGTTTCTGGTCCTGCGTATCCC
TGCCGCCTCGGTCAATCGTTGA
|
| Protein sequence : | |
MITTMPLDAVSTARANAYRKTAWRLMPFLMLCYLCAYLDRVNVGFAKLTMMNDLAFSEAVYGLGAGMFFIGYFLCEVPSN
LILHRVGARRWIARIMISWGIISALFAFVETEWQFYALRFLLGVAEAGLAPGLLLYLTYWFPSYRRARMTVLWFIAIPLS
GMIGGPLSGYIMGTFAGFHGWAGWQWMFVIEAIPTVIVGLMVLAYLKDGVHQATWLTDDEKELIKKELAEDNSQKVVHAS
VGEFVRDRRLWLLACIYFCVVMGQYAITFWLPTLIRNAGLADPLHIGLMTSVPYLCAIVAMLLMGRSGDKHRERRWHLVL
PMIAGALGLSLAAVFGNSLLLSVLSLCLAAAGVLSASSLFWMLPTTLLGGVSAAAGIAGINSFANLAGFCSPYLIGWITT
TTGSSAIGMYLITGVLFIGAFLVLRIPAASVNR
|
|
