Name : unnamed
Accession : AAT96169.1
PAI name :
PAI accession : AY597277
Strain :
Virulence or Resistance: Virulence
Product : HopPtoA1-like protein
Function : -
Note : similar to Pto DC3000 HopPtoA1; PAI-R1-ORF77
Homologs in the searched genomes : 3 hits ( 3 protein-level )
Publication :
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Halldorsdottir,S.S., Kreitman,M. and Bergelson,J., "Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis", Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5887-5892 (2006) PUBMED 16581904.
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Kreitman,M. and Bergelson,J., "Direct Submission", Submitted (12-APR-2004) Ecology and Evolution, University of Chicago, 1101 E. 57th St., Chicago, IL 60637, USA.
| DNA sequence : | |
ATGCAGTCTGTCAATCACTCCATGCGCGCTCAGAGCCTGGAAATTACACGCATGCAGTCCTCTCGTGCGTCCAATGACGC
AAGCTCGGTGGAGGCTGCCAGCGTCACGGATCAGGCGAACCATCTGGACATCGTCGAACACCTGAATAGCTATTTCGAAG
TCCATAAAATGCCTGTTAGCGGTTCAGTCTCCGCGGCGGACGGCGATGAGTTGCGTGCAAATCAGGCGCACAACGACAAG
ATCAATGCGTTGGTCAGCAGTCGTGCCAGAGTTCTGGTCGATATGGGCGAAACCAAGGCAATGATCGCTGATACCTTTGC
CAAGGCAGAAATGCTGGATCGATTGGCCACCACTGCCTCAAGCGCACTACGGGCAGTGCCGTTCGCCGGGGCCTCTGTAC
TGCAATACATGCAGCCCGCGATCAACAAAGGTGATTGGCTGCCGACTTCGCTCAAGCCCCTGACACCTCTTATTTCAGGG
GCAGTGTCCGGTGCCATGGACCAGATAGGCACCGCCATGATGAACAGGGCGACCGCTGATATTCATTACCTCAAAGCCGC
ACCGGAAGATCTTCACGACGTTCTTGCGGCTTCCGTCAAACGTCATGCGCCAGGACTTGCCCGGCAATCATTGGACTTGG
GCATTGCCGTGCAGACCTATACGGCGCGTAATGCCTTGCGTACTGTTCTGGCTCCCGCGCTTGCCTCCCGTCCCGAAATA
CAGGGTGCAGTAGATATCAGTGTTTCAGCAGCAGGTGGACTGGTGGCCAACGCAGGCTTGGGCAATCGCATGCTCAGTGT
TCAGGCGCGGGACCATCAGCGTGGCGCGGCGCTCGTGCTGGGCCTTAAAGACAAGCAACCCAAAGCCACACTGGATGAGG
AGACGGATTGGCTCGAAGCCTATAACGCGATCAAGTCTGCCAGCTACTCCGGCGCGGCGATAAATGCGGGCAAGCGGATG
GCCGGTTTGCCCCTGGATGCCATGACTGACGGAGTAAAAGCGGTCGCCGGCTACATGACCGGAACCAGCCTGATGAAAAA
CGGCCTGGTACTGGCGGGTGGCTTTGCTGCTGTCGGTAAGGTTCAAGAGGCGGGAACCCGCACTATCAGTAATCCTGTGA
CCAAGGCCTTGGTCAGTCAGGTCACTAATCTGGCCGGTTCGGCGCCTGTGTTTGCCGCATGGACCACGGTGGATGTCGTC
GGTGACACGCTGACGGACAAAACCGAGGCGTTCATCCAGAACACCGTGAAGTCATCCGCGTCGAGTGCAGCGGACTATGC
TGCCGCGCGCACGGCAAAGCTGGCTACAGACGGCTTGCGCGCGAGCGGGGAGGCGATGACGTACACAGGTGAGAGGTTGC
GCCAGACGTTCGATACGTTGCGTCATCGCACTGTGCGTGAGCCTGATATTGAGGAAGGCGGCCGTTCGGCAGGCTAG
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| Protein sequence : | |
MQSVNHSMRAQSLEITRMQSSRASNDASSVEAASVTDQANHLDIVEHLNSYFEVHKMPVSGSVSAADGDELRANQAHNDK
INALVSSRARVLVDMGETKAMIADTFAKAEMLDRLATTASSALRAVPFAGASVLQYMQPAINKGDWLPTSLKPLTPLISG
AVSGAMDQIGTAMMNRATADIHYLKAAPEDLHDVLAASVKRHAPGLARQSLDLGIAVQTYTARNALRTVLAPALASRPEI
QGAVDISVSAAGGLVANAGLGNRMLSVQARDHQRGAALVLGLKDKQPKATLDEETDWLEAYNAIKSASYSGAAINAGKRM
AGLPLDAMTDGVKAVAGYMTGTSLMKNGLVLAGGFAAVGKVQEAGTRTISNPVTKALVSQVTNLAGSAPVFAAWTTVDVV
GDTLTDKTEAFIQNTVKSSASSAADYAAARTAKLATDGLRASGEAMTYTGERLRQTFDTLRHRTVREPDIEEGGRSAG
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