Name : hrcV
Accession : AAT96139.1
PAI name :
PAI accession : AY597277
Strain :
Virulence or Resistance: Virulence
Product : HrcV
Function : -
Note : PAI-R1-ORF47
Homologs in the searched genomes : 72 hits ( 72 protein-level )
Publication :
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Halldorsdottir,S.S., Kreitman,M. and Bergelson,J., "Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis", Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5887-5892 (2006) PUBMED 16581904.
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Kreitman,M. and Bergelson,J., "Direct Submission", Submitted (12-APR-2004) Ecology and Evolution, University of Chicago, 1101 E. 57th St., Chicago, IL 60637, USA.
| DNA sequence : | |
ATGAATAGAGTCATCAATCTGTTGAACGGCGTGGCGCTGGCAGCCATGCGCCGCTCGGAACTGGTCGGCGCGTTCTTCGT
GATCGCCATCGTGTTCATGATGATCACTCCCCTGCCAACCGGCCTGGTGGACGTGCTGATTGCCGTGAACATCTGCATCT
CCTGCCTGCTCATCATGCTGGCGATGCACCTGCCCAGGCCGCTGGCGTTTTCGACGTTCCCGGCGGTGCTACTTCTGACC
ACCATGTTTCGCCTGGCGCTGTCGATCTCCACGACCCGTCTGATTTTGCTCAACCAGGATGCCGGACACATCGTCGAAGC
CTTCGGCCAGTTCGTGGTGGGCGGCAACCTTGCGGTGGGTCTGGTGATCTTCCTGATCCTGACCGTGGTCAACTTCCTGG
TCATCACCAAGGGTTCCGAGCGTGTCGCTGAAGTCGGTGCGCGCTTCACTCTGGACGCGATGCCCGGCAAACAGATGTCC
ATCGACAGTGATTTGCGCGCCAACCTGATCAGCGTCCAGGAAGCGCGCAAACGTCGGGCCGAACTGAACAAAGAGAGCCA
ATTGTTCGGTGCAATGGACGGTGCGATGAAGTTCGTCAACGGCGATGCCATCGCCGGCTTGATCATCGTTGCGATCAACA
TGATCGGCGGTATCTCCATCGGCGTGGTGCAGCACGGCATGACGGCGGGCGACGCGCTGCAGCTGTACACCGTACTGACC
ATCGGCGACGGCCTCATCGCGCAGATCCCGGCGCTGCTGATCTCGGTCACCTGCGGCATGATCATTACCCGCGTCCCCAA
CACTGACGCGGGTGCGGAAGCGAACATTGGCCGCGAAATCGCCGAGCAGATCACCAGCCAGCCAAAAGCCTGGATTATCG
CCTCCGTGGCCATGCTCGGCTTTGCTGCGCTGCCCGGTATGCCGACCGGGGTGTTCATCACCATCGCTATCATTTGCGGC
GCGGGTGGTTTGCTGCAATTGCAACGGGCCAAACCCAAGAAAGCGCAGGACGGTGCAGTGGCCGTGGCCCCAGAGATGAA
CGGTAAGGAAGACTTGCGCACGTTTGCACCCAGCCGCCAGTTTGTCCTGCAGTTTCACCCGAGCCAGAACCTGCAGCAGA
TCGAGGCGCTGGTCAGCGAGATCAGACAGCGTCGCAATCGACTGGTGATCAACTACGGCCTCACCCTGCCCTCTTTCATC
ATTGAACAGTCACAGCATCTGCAACCGGACGAATTCCGTTTCACGGTGTATGAAGTGCCACTGCTCAAAGCCACCTTCAG
CCAAAGCCACGTAGCGGTGAGCGCTCGTCAGGTGAACGGCGAAAACATGCCCTCTGCCATTCCCGGCAACACGGACCGCC
AAGAGGAACAATGGGTCTGGATACCGGCCGACGCGCCTGAACTTCAAGACAACCCACTCAATGGCGTGAGCGCCATGACG
CTGATCATCGAACGCATGGAGCGCGCGTTGCAGGCTTGCGGGCCGCAGTTCATCGGCTTGCAGGAAACCAAGGCCATCCT
CGGCTGGCTGGAGAACGAGCAGCCGGAGCTGGCCCAGGAGATGCAGCGGGTACTGACCCTGACGCGATTCTCTGCTGTCC
TGCAACGCTTGGCTGCGGAATGCGTACCGCTGCGCGCCATCCGGGTGATCGCCGAAACCCTGATCGAGCATGCCCAGCAC
GAGCGCGATGTCAGCGTGCTGACCGACTACGTGCGTATCGCCCTCAAGTCGCAGATCTACCACCAATATTGCGGCACCGA
AGGTCTGCTGGTCTGGCTGTTGACGCCGGAAAGTGAAGGATTGCTGCGCGACGGCTTACGCCAGACACAGACCGAAACCT
TTTTTGCGCTTGGCAACGAGGTCAGCCAGATGCTCGTGCAACAACTGCACATGGCGTTCCCTTTGCGGGCGCCCGAGCAG
GCTGTTCTGTTGGTCGCGCAGGATTTGCGCAGCCCGCTGCGCAACTTGCTCAAGGAAGAGTTCTACCACGTCCCGGTGTT
GTCTTTCGCCGAAATCAGCAATGCGGCCAAGGTCAAAGTCATGGGTCGTTTCGACCTGGAAGATGATCTCGAGCCGTTGG
ATAACGAGCATGCGGCCTGA
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| Protein sequence : | |
MNRVINLLNGVALAAMRRSELVGAFFVIAIVFMMITPLPTGLVDVLIAVNICISCLLIMLAMHLPRPLAFSTFPAVLLLT
TMFRLALSISTTRLILLNQDAGHIVEAFGQFVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVGARFTLDAMPGKQMS
IDSDLRANLISVQEARKRRAELNKESQLFGAMDGAMKFVNGDAIAGLIIVAINMIGGISIGVVQHGMTAGDALQLYTVLT
IGDGLIAQIPALLISVTCGMIITRVPNTDAGAEANIGREIAEQITSQPKAWIIASVAMLGFAALPGMPTGVFITIAIICG
AGGLLQLQRAKPKKAQDGAVAVAPEMNGKEDLRTFAPSRQFVLQFHPSQNLQQIEALVSEIRQRRNRLVINYGLTLPSFI
IEQSQHLQPDEFRFTVYEVPLLKATFSQSHVAVSARQVNGENMPSAIPGNTDRQEEQWVWIPADAPELQDNPLNGVSAMT
LIIERMERALQACGPQFIGLQETKAILGWLENEQPELAQEMQRVLTLTRFSAVLQRLAAECVPLRAIRVIAETLIEHAQH
ERDVSVLTDYVRIALKSQIYHQYCGTEGLLVWLLTPESEGLLRDGLRQTQTETFFALGNEVSQMLVQQLHMAFPLRAPEQ
AVLLVAQDLRSPLRNLLKEEFYHVPVLSFAEISNAAKVKVMGRFDLEDDLEPLDNEHAA
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