Name : hrpK
Accession : AAT96136.1
PAI name :
PAI accession : AY597277
Strain :
Virulence or Resistance: Virulence
Product : HrpK
Function : -
Note : PAI-R1-ORF44
Homologs in the searched genomes : 8 hits ( 8 protein-level )
Publication :
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Halldorsdottir,S.S., Kreitman,M. and Bergelson,J., "Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis", Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5887-5892 (2006) PUBMED 16581904.
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Kreitman,M. and Bergelson,J., "Direct Submission", Submitted (12-APR-2004) Ecology and Evolution, University of Chicago, 1101 E. 57th St., Chicago, IL 60637, USA.
| DNA sequence : | |
ATGCGTATAACCGGTTCTTCCAGCTTCAGCGGTAATGTGTCCTCAATACCCACTGGTGAGCTGGCGGACGCTTCGCCGGT
TGCCCGAAACCTGAGCACTCCGGGCGCAGGCGTGGAGTTTGGTCAGTCGGGTCAGAGCCTTTCGGACCTGCTCACCAGTG
CCGACGATACCGCCTCATCCGTCGCCTCATTCTTCTCTCCAGGCGGTGCGTCTGCCAACAGCGACGTCGGCTCCTTCTCT
GATTTCTCAGACATCTCACGCTCCAGCTCGTTTTCGTCGGTCAACAGCACCGCCAGCAGCGAAGCCTCTGATTCGGCCAA
TGCGCCCAAAGCCGATGACGCGGCCTTTCTTGATAACTCCAGATTCTCCTCCCCTGAAGCGCTCGAACGCTGGGCACCGA
TGGTTGCCCACTTGCCCCCGGAGCAGCGCGAGCAAGCGGCCAAGGAGCTGAATCGGCCTATCGCCGCCGCATGGATGGCT
AGAGAGGACGGCCCTGATGCGGCGAAAGCGATGGAGTTCATCAACGACAATCCGGCGCTCAAGACCGCAGTGGACACCGC
GCAGGGCGGCACGGCCGATGGCAAGATCACCAACAAGGACTTGAAAACCTTCGCCAAGAATATGGAGAAGGCTGCCAAAA
GTGCTGACAAGGACGTGGAGAACTACCAGAAGGACAATCCGAACGCGGATCCGCAATCCCTGGAAATGGTGCGTAATGCC
GCCGTGATGCGCGCCAACATGCCGCTGGCCCAGGCTGCCGATCCTCACAATGAGCTGGGTGTCGAGGGTCAGACCAAGGT
CGATGACAACGTGGGGGCCGATGATCTGAAGAACCTGGCCGCCAATAACCCCGGGCTTTCCGGGGCGCTCAAACAGTCGT
GCAGCACCTGGTCGCAAGCGGGCTTTCTTGGCCAGCTCGATGAGGCGGGAATGAAGGGCCGTGCCAAGGCTGCACACAGC
CCCGATAAACTGTTCAATGCAAAAAACCTGAGTGAGTGGATCAAGAAAAGCGCCCCCACCAACGGCGGCCAGTTCGCGAG
CATGCTCAGTGACGCCGCCACGCTCAACTCGGTGGATGGTATCGACATCAGCAAGCTGAACGCGAACGTGTTTGATAATC
CGACAGCGTACACCGGCGCCCAGAAAGCGGCGGTGATGATCAAGCTGCAACAGACACAGCAAAGCGTGATTGCAGGGCGC
GAGTTGCGCGATACGGAAAATACCGAGCAGGGGCTTACGGATCGGATTGCGAAGTTGCAGGCTGATCCCGATGTGCAGGC
CTTCCTTAATGACAGCGTTCCCAAGGAGGAGCGCAGGCTGGTAAGCAGCGATTCAGCGCTCAAGGATGCGTGCGTCAAGC
AGGCTGATAGCGTCAACAGCGGTCAGGCGTTACAGACCGATATGGCAACCGCCGACAAGGCCGTCAACAAGCATAACCCC
AACCCCGATTACAGCAGCGCCATCAGTGGCCTGTCCGCCCAGTTGCAGTTACAGCATGACCTTTTCCCCGACACGCAGGT
GCCGAACCCTCGTGACGTCGTCAGCAAAAATCCTCAGTTGGAGTCGACGATCAAAGACTCCTACACGAACAACTTTGCAA
ACGGTGGTGCACTCAAGCAGCTGCTTGGCCAGAAAAAAGTCGATGGCGAACAGGCTATGCAAATGATGGCTGGCCAGAAG
GCGGCCTACGACAGTGTGTTGTCCAGCGACGTCACCGACAGTGTGAAAGAGGATTACGCCAACTCCACGGTTCGCGAACT
GCAGGACTCCAAGAAAGGGCGCAAGCTGCTGGAAGGCAAGACCGACGAGAGCCATGCATCCGCTCTGGCGAGCGAACTCC
TCGCAGGTGGCGGGCCGAAAATGCTCAGGTCTGTCATGGGATTTATGTCCGTAAAGGACATGCTCGCCCACGGCGACAAA
CTGGGTGCGGCGCAAGCGATCTACGACAGCACCAAATACGGCGCGCAGGCAATCAAGGGCGGAGTCGACGCCGGTGCCAA
GTTGCTGGGCCGCGAAGCCTCGGTCGGGCTTGGCCGTATGGCCGGGCAAATGGTCGGGCGCGCTGTGGGTATGGTTGCCG
GCGAAGCAGCCGGTATGGCTGCCGGCATGGCAGTCGGTGCATCGATCCCCGTCATCGGCTGGGCGATTGACGGCGCGATG
GCGCTGGGCTTCGGGATTTCAATGATTATCGATGCCGTCAAAAAGCACAAAGCGCAGAAAGCGTTCGACCATAACGTGGA
TCCGGTGCTGGATCAGTTCGGGATTGCGAAGGCGCATTGA
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| Protein sequence : | |
MRITGSSSFSGNVSSIPTGELADASPVARNLSTPGAGVEFGQSGQSLSDLLTSADDTASSVASFFSPGGASANSDVGSFS
DFSDISRSSSFSSVNSTASSEASDSANAPKADDAAFLDNSRFSSPEALERWAPMVAHLPPEQREQAAKELNRPIAAAWMA
REDGPDAAKAMEFINDNPALKTAVDTAQGGTADGKITNKDLKTFAKNMEKAAKSADKDVENYQKDNPNADPQSLEMVRNA
AVMRANMPLAQAADPHNELGVEGQTKVDDNVGADDLKNLAANNPGLSGALKQSCSTWSQAGFLGQLDEAGMKGRAKAAHS
PDKLFNAKNLSEWIKKSAPTNGGQFASMLSDAATLNSVDGIDISKLNANVFDNPTAYTGAQKAAVMIKLQQTQQSVIAGR
ELRDTENTEQGLTDRIAKLQADPDVQAFLNDSVPKEERRLVSSDSALKDACVKQADSVNSGQALQTDMATADKAVNKHNP
NPDYSSAISGLSAQLQLQHDLFPDTQVPNPRDVVSKNPQLESTIKDSYTNNFANGGALKQLLGQKKVDGEQAMQMMAGQK
AAYDSVLSSDVTDSVKEDYANSTVRELQDSKKGRKLLEGKTDESHASALASELLAGGGPKMLRSVMGFMSVKDMLAHGDK
LGAAQAIYDSTKYGAQAIKGGVDAGAKLLGREASVGLGRMAGQMVGRAVGMVAGEAAGMAAGMAVGASIPVIGWAIDGAM
ALGFGISMIIDAVKKHKAQKAFDHNVDPVLDQFGIAKAH
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