Name : unnamed
Accession : AAT96071.1
PAI name :
PAI accession : AY597275
Strain :
Virulence or Resistance: Not determined
Product : site-specific recombinase
Function : -
Note : PAI-R1-ORF14
Homologs in the searched genomes : 22 hits ( 22 protein-level )
Publication :
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Halldorsdottir,S.S., Kreitman,M. and Bergelson,J., "Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis", Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5887-5892 (2006) PUBMED 16581904.
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Kreitman,M. and Bergelson,J., "Direct Submission", Submitted (12-APR-2004) Ecology and Evolution, University of Chicago, 1101 E. 57th St., Chicago, IL 60637, USA.
| DNA sequence : | |
ATGAAACGTTCTGAGATCAAGCGTCGCCCCCTCGCAGACACCACACTTGCTGGGTTGGAGCCTGATTCGAAGGAATATCG
GGAGCTTGACGGTAACGGCCTCTATCTCAGGGTCAAACCTGACGGTGGAAAATCATGGCAGCTCCGATACAAACGGCCTG
CGGGTAACTGGGCGTGGATGGGGCTCGGGGGCTACCCAGAAGTGAGCGGCGCACTCGCAAGAGAAAAAGCAGCCGAACTT
CGTAAGGTTGTAAGTGGCGGTGCTGACCCCTTGGAACAGAAGCGCGCTGCAAAAGAAGCAATCGATGTCGCCAAAAGCCG
AACCTTTAGAGCCGCCGCAGAAGCCTGGCTTAAGGCGAAAGATGAAAAGGGACTCGCACCTTCAACTCTGAGCAAAATCA
AAACTTACCTCGATAAGGACATCCTCCCGGCTTTGGGAGATATACCTCTCGACAAAATCACCCGCACAGATTGCGCAGAC
CTTCAGGCTTCTATAGAAGCTCGAAATGCACACAACGTAGCGGAGAAATGTCGCACTTGGGTCAACCAGATTTTTGGGAG
GGCCATTGCGCTAGGCTTGACTGAAAACGATCCGGGCAGCCGCCTCCGTGATATTGCAGCGCAAGCCCCTAAGACTCAGC
AGCATCCGCATTTGCTGGAGCCCGAGCTGGGTGACTTCCTCACGGCACTTAAAACGACCCCCAGTAGACTGACGGCCCGC
ACCGCTGCTTGGCTTTGTATTTGGACAGCGTCTCGACCAGGCATGGTTCGATTAGCCGAATGGAAGGAAGTCAATCTTGA
AGCCGGGCTTTGGACGACACCTGCAACGAAAATGAAGATGCGGAGAGACTTTGTTTGCCCACTCCCCTCTCAGGCCATTG
AGGCGTTGAAGGAACTTCATGCGCTGACAGGCAGGAGTCGGTGGCTATTTCCAGGTGTCGGAGCAAAAAATCCAACGATC
AGCGAAAACACCATTAACAAGGTTTTCGCAACGATCGGTTACAAGCGTCGGCTTGTAGGGCACGGCACCAGACACACCGC
GAGCACACTACTCCGTGAGCACGGCTTTCCTAAGGAGCACGTAGAAGCACAACTTGCTCATAAGGAGGGAGGTGTGTCCG
GCGTGTACAACAAAGCTCAATACCTAGATCACCGCATCAAGATGATGCAGTGGTACGCGGATTACCTCGATGCATTAGCA
GCAGGCAATGTAGCGCAAGGTCGATTTGGAAAGGCAGTATGA
|
| Protein sequence : | |
MKRSEIKRRPLADTTLAGLEPDSKEYRELDGNGLYLRVKPDGGKSWQLRYKRPAGNWAWMGLGGYPEVSGALAREKAAEL
RKVVSGGADPLEQKRAAKEAIDVAKSRTFRAAAEAWLKAKDEKGLAPSTLSKIKTYLDKDILPALGDIPLDKITRTDCAD
LQASIEARNAHNVAEKCRTWVNQIFGRAIALGLTENDPGSRLRDIAAQAPKTQQHPHLLEPELGDFLTALKTTPSRLTAR
TAAWLCIWTASRPGMVRLAEWKEVNLEAGLWTTPATKMKMRRDFVCPLPSQAIEALKELHALTGRSRWLFPGVGAKNPTI
SENTINKVFATIGYKRRLVGHGTRHTASTLLREHGFPKEHVEAQLAHKEGGVSGVYNKAQYLDHRIKMMQWYADYLDALA
AGNVAQGRFGKAV
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