Name : hrpL
Accession : AAR25629.1
PAI name : Not named
PAI accession : AY463491
Strain : Pseudomonas sp. UW4
Virulence or Resistance: Not determined
Product : RNA polymerase sigma factor HrpL
Function : -
Note : alternative sigma factor
Homologs in the searched genomes : 8 hits ( 8 protein-level )
Publication :
-Rezzonico,F., "Direct Submission", Submitted (12-NOV-2003) Plant Pathology, ETH Zuerich, Universitaetstr. 2, Zuerich 8092, Switzerland.
-Rezzonico,F., Defago,G. and Moenne-Loccoz,Y., "Comparison of ATPase-encoding type III secretion system hrcN genes in biocontrol fluorescent Pseudomonads and in phytopathogenic proteobacteria", Appl. Environ. Microbiol. 70 (9), 5119-5131 (2004) PUBMED 15345390.
| DNA sequence : | |
ATGGTTATTGTCCATGTGTGTAATCAACTCGATCACTTATCCGGCTCCGGCTTCTCTCCTTCGTCAGCTCGACCGCAGGA
TGGTGCAGAACGGGCGGTTGTTTATAACGGGCCAAAGGTCGCGAACCCTGATGATGCGGAGGATCTGCTCCAGGCAACCT
TCCTCGAAGCGCTACGTAACGAGCACAAGTTTCGGCACGACTCGCTGCTGCTGACCTGGCTCTGCGGCATTGCCTTCAAC
CTCATTCGCAGTCATTTCAGGCGCCTCTACAACCAGCCGTTTCATGACGACCTGCAAGAGTGCGGTGTATTGGAAATGGC
CGACAGTCGCGATGTTGTGTCCGAGGTCAGTGGCTTGCGTCAGCTGGTGCGAGTCTTTCGTGCGATGGAAACCTTGCCGC
CGAATATGGAGGAGGTGATTCGGGTCGCGATGGAAATGGAAGGTAATTACCTGGAGACCGCCGCTCGGCTGGATATACCG
GTTGGCACGGTGCGTTCGCGTTTGTCGCGGGCCCGCGAGCAACTCAAGCGGCGAGTCTCCAGCGAGTACTGA
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| Protein sequence : | |
MVIVHVCNQLDHLSGSGFSPSSARPQDGAERAVVYNGPKVANPDDAEDLLQATFLEALRNEHKFRHDSLLLTWLCGIAFN
LIRSHFRRLYNQPFHDDLQECGVLEMADSRDVVSEVSGLRQLVRVFRAMETLPPNMEEVIRVAMEMEGNYLETAARLDIP
VGTVRSRLSRAREQLKRRVSSEY
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