PAI Gene Information


Name : cag17 (HP0538)
Accession : AAR03961.1
PAI name : cag PAI
PAI accession : AY330644
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : Cag17
Function : -
Note : cagN; jhp0486
Homologs in the searched genomes :   45 hits    ( 44 protein-level,   1 DNA-level )  
Publication :
    -Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Comparative analysis of the complete cag pathogenicity island sequence in four Helicobacter pylori isolates", Gene 328, 85-93 (2004) PUBMED 15019987.

    -Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Direct Submission", Submitted (26-JUN-2003) Biotechnology, Royal Institute of Technology, Alba Nova University Centre, Roslagstullsbacken 21, S-106 91 Stockholm, Sweden.


DNA sequence : 
ATGATCTTGAAAAGTATCTTCAAAAAACTAGGTTCTGTCGCTCTTTATTTTTTAGTTGTTTATGGGGGATTAAACGCTAT
CAATACAGCATTATTGCCGAGTGAATACAAAAAATTAGTGGCTTTAGGCTTTAAAAAAATCAAAACACTCTATCAAAGAC
ATGACGACGAAGAAGTTACAGAAGAGGAAAAAAAATTCGCCACTAACGCTTTGAGAGAAAAATTACGAAATGATAGGGCG
AGAGCAGAGCAAATTCAAAAGAATATTGAAGCGTTTGAAAAAAAGAACAACTCTTCTATTCAAAAAAAAGCGGCTAAGCA
CAAAGGATTACAAGAATTAAACGAAATTAACGCTAACCCTTTGAATGACAACCCTAATAGCAATTCTTCCACTGAAACCA
AATCTAATAAAGATGATAACTTTGATGAAATGATCAATAAGGTGAATGAAGCTTTTGTAAAACCTGCTGCTCCGCTTGTG
CCTGATGAGTGGAGAACACCTGAAATTGAAATCATTATCAATGAGTGTATTATTTCAAGCAACGATTACGATGGGTTAAG
AAAGTGTTTGATCAAAGGCATCAAGGATCAAAAAATTCTTGCCCCCTTATTAGAAAAAATTCAAGAAATAGAGACAGAAA
ATAACAAGTTTTCTAGACAACGCTTGAGTGGTTTAAAACTCGCTCTTAATAACAGCAACAATAGAACCTTTCTTATAGCT
TCGTGTGCTATTTGTGAGAAGAGAAAAAAAGAAATGGAGCAAGAAAATAACTACCAAGATACTACAAATGCAAGCGAGTT
TGGAGCTACTGATACAAAAGAAAATGAAGCAAAAGATGCAACATTCTCAAACAATCGCTCTAAATCCGAACTGCCCAATA
GCGTCATTAATCAAATAGAACAAAGCATCGCTCATGGAAAAAAATAG

Protein sequence : 
MILKSIFKKLGSVALYFLVVYGGLNAINTALLPSEYKKLVALGFKKIKTLYQRHDDEEVTEEEKKFATNALREKLRNDRA
RAEQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNEINANPLNDNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPAAPLV
PDEWRTPEIEIIINECIISSNDYDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQRLSGLKLALNNSNNRTFLIA
SCAICEKRKKEMEQENNYQDTTNASEFGATDTKENEAKDATFSNNRSKSELPNSVINQIEQSIAHGKK