PAI Gene Information


Name : cag12 (HP0532)
Accession : AAR03956.1
PAI name : cag PAI
PAI accession : AY330644
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : Cag12
Function : -
Note : cagT; jhp0481; orf19; virB7-like protein
Homologs in the searched genomes :   46 hits    ( 46 protein-level )  
Publication :
    -Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Comparative analysis of the complete cag pathogenicity island sequence in four Helicobacter pylori isolates", Gene 328, 85-93 (2004) PUBMED 15019987.

    -Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Direct Submission", Submitted (26-JUN-2003) Biotechnology, Royal Institute of Technology, Alba Nova University Centre, Roslagstullsbacken 21, S-106 91 Stockholm, Sweden.


DNA sequence :
ATGAAAATGAGAGCAAGTGTTTTAATCGGTGCGACAATTCTGTGCTTAACTTTAAGCGCGTGCAGTAATTATGCGAAAAA
AGTGGTGAAACAAAAGAACCATGTTTATACGCCTGTGTATAATGAACTGATAGAGAAGTATAGTGAGATACCCTTAAATG
ACAAGCTCAAAGACACACCATTCATGGTGCAAGTGAAGTTGCCAAATTACAAGGACTATTTGTTGGATAATAAACAAGTT
GTACTAACTTTCAAACTTGTTCATCATTCTAAAAAGATTACGCTCATAGGCGATGCCAATAAGATACTTCAATACAAGAA
TTACTTCCAAGCTAACGGGGCAAGATCCGACATTGATTTTTACTTGCAGCCTACTTTGAATCAAAAGGGTGTGGTGATGA
TAGCGAGTAACTACAATGATAATCCTAACAGCAAAGAAAAACCACAGACCTTTGATGTGTTGCAAGGAAGTCAGCCAATG
CTAGGAGCTAACACAAAAAACTTGCATGGCTATGATGTGAGTGGAGCAAACAACAAGCAAGTGATCAATGAAGTGGCAAG
AGAAAAAGCTCAGCTAGAAAAAATCAATCAGTATTACAAGACTCTCTTACAAGACAAGGAACAAGAATATACCACTAGGA
AAAATAACCAACGAGAAATTTTAGAAACATTGAGTAATCGTGCAGGTTATCAAATGAGGCAGAATGTGATTAGTTCTGAG
ATTTTTAAGAATGGCAACTTGAACATGCAAGCCAAAGAAGAAGAAGTTAGGGAGAAGCTACAAGAAGAAAGAGAGAATGA
ATACTTGCGCAATCAAATCAGAAGTTTGCTCAGTGGTAAGTGA

Protein sequence :
MKMRASVLIGATILCLTLSACSNYAKKVVKQKNHVYTPVYNELIEKYSEIPLNDKLKDTPFMVQVKLPNYKDYLLDNKQV
VLTFKLVHHSKKITLIGDANKILQYKNYFQANGARSDIDFYLQPTLNQKGVVMIASNYNDNPNSKEKPQTFDVLQGSQPM
LGANTKNLHGYDVSGANNKQVINEVAREKAQLEKINQYYKTLLQDKEQEYTTRKNNQREILETLSNRAGYQMRQNVISSE
IFKNGNLNMQAKEEEVREKLQEERENEYLRNQIRSLLSGK