Name : cag3 (HP0522)
Accession : AAR03945.1
PAI name : cag PAI
PAI accession : AY330643
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : Cag3
Function : -
Note : cag-delta; jhp0471; orf8
Homologs in the searched genomes : 46 hits ( 46 protein-level )
Publication :
-Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Comparative analysis of the complete cag pathogenicity island sequence in four Helicobacter pylori isolates", Gene 328, 85-93 (2004) PUBMED 15019987.
-Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Direct Submission", Submitted (26-JUN-2003) Biotechnology, Royal Institute of Technology, Alba Nova University Centre, Roslagstullsbacken 21, S-106 91 Stockholm, Sweden.
| DNA sequence : | |
ATGAGTCTTTTTACAGCTGTATCACTTATCTTAAATGCAAGGGAATTTTGTCTCTATATCAATCTGAAAAAAAGGAAACT
AATGTTTAGAAAACTGGCAACCTCTGTATCGCTCATAGGCTTACTAACCTCTAACACTCTTTATGCTAAAGAAATAAGTG
AAGCCGATAAGGTCATTAAGGCCACTAAAGAAACTAAAGAGACCAAGAAAGAAGCTAAACGACTCAAAAAAGAAGCTAGA
CAGCGCCAACAGATCCCTGATCATAAGAAACCTCAATATGCCTCTGTTGATGACACAAAAACTCAAGCGCTTTTTGATAT
ATACGACACCTTGAATGTGAATGACAAAAGCTTTGGGGATTGGTTTGGTAATAGCGCTTTGAAAGACAAAACCTATCTCT
ACGCTATGGATCTATTGGATTACAACAACTATTTATCCATAGAAAACCCCATTATCAAAACAAGAGCGATGGGGACTTAT
GCGGATCTCATCATCATCACAGGTTCGTTAGAACAAGTCAATGGGTATTACAACATTCTAAAAGCGCTCAACAAACGAAA
CGCTAAGTTTGTTCTAAAAATCAATGAGAACATGCCTTATGCCCAAGCGACTTTTTTACGAGTGCCAAAAAGAAGCGATC
CTAATGCCCACACGCTTGATAAGGGAGCGGCAATTGATGAGAACAAGCTTTTTGAACAACAAAAACGCGCGTATTTTAAC
TACGCCAACGATGTGATCTGCAGACCCAATGATGAAGTGTGTTCGCCCCTAAGAGATGAGATGGTCGCTATGCCCACTAG
CGATAGCGTTACTCAAAAACCCAATATCATTGCTCCTTATAGCTTGTATAGACTAAAAGAGACAAATAACGCCAATGAGG
CCCAACCATCACCTTATGCCACTCAAACCGCTCCTGAAAACAGCAAAGAGAAGCTCATAGAAGAGCTAATCGCTAACTCC
CAACTCATAGCCAATGAAGAAGAGAGGGAAAAGAAACTCTTAGCAGAAAAAGAAAAACAAGAGGCTGAATTGGCTAAATA
CAAGCTCAAAGACTTAGAAAATCAAAAGAAACTAAAAGCTTTAGAAGCAGAGTTGAAAAAGAAAAATGCTAAGAAACCTA
GAGTAGTGGAAGTGCCTGTTTCTCCTCAAACAAGTAATTCTGATGAAACAATGAGGGTTGTTAAAGAAAAAGAAAACTAC
AATGGGTTGTTAGTGGATAAAGAAACCACGATCAAAAGAAGCTATGAGGGGACTTTGATCAGCGAAAATTCTTACAGCAA
AAAAACACCTCTCAACCCTAATGACTTGAGGAGCTTAGAAGAAGAAATTAAGAGCTATTATATCAAGTCTAATGGCTTGT
GTTATACTAATGGCATTAATCTCTATGTAAAAATCAAAAACGACCCCTATAAAGAGGGAATGCTGTGTGGTTATGAGAGC
GTTCAAAATCTGCTCTCACCTTTAAAAGACAAGCTCAAATACGACAAGCAAAAGTTACAAAAAGCGTTATTGAAAGATTC
AAAGTAA
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| Protein sequence : | |
MSLFTAVSLILNAREFCLYINLKKRKLMFRKLATSVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAR
QRQQIPDHKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSIENPIIKTRAMGTY
ADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLRVPKRSDPNAHTLDKGAAIDENKLFEQQKRAYFN
YANDVICRPNDEVCSPLRDEMVAMPTSDSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANS
QLIANEEEREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPVSPQTSNSDETMRVVKEKENY
NGLLVDKETTIKRSYEGTLISENSYSKKTPLNPNDLRSLEEEIKSYYIKSNGLCYTNGINLYVKIKNDPYKEGMLCGYES
VQNLLSPLKDKLKYDKQKLQKALLKDSK
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