Name : cag23 (HP0544)
Accession : AAR03936.1
PAI name : cag PAI
PAI accession : AY330641
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : Cag23
Function : -
Note : cagE; jhp0492; virB4-like protein
Homologs in the searched genomes : 43 hits ( 43 protein-level )
Publication :
-Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Comparative analysis of the complete cag pathogenicity island sequence in four Helicobacter pylori isolates", Gene 328, 85-93 (2004) PUBMED 15019987.
-Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Direct Submission", Submitted (26-JUN-2003) Biotechnology, Royal Institute of Technology, Alba Nova University Centre, Roslagstullsbacken 21, S-106 91 Stockholm, Sweden.
| DNA sequence : | |
GTGTTTGTGGCAAGCAAACAAGCTGACGAACAAAAAAAGCTAATCATAGAGCAAGAGGTTCAAAAGCGCCAATTTCAAAA
AATAGAAGAGCTTAAAGCAGACATGCAAAAGGGTGTCAATCCCTTTTTTAAAGTCTTGTTTGATGGGGGGAATAGGTTGT
TTGGTTTCCCTGAAACTTTTATTTATTCTTCTATATTTATATTGTTTGTAACAATTGTATTATCTGTTATTCTTTTTCAA
GCCTATGAACCTGTTTTGATTGTAGCGATTGTTATTGTGCTTGTAGCTCTTGGATTCAAGAAAGATTACAGGCTTTATCA
AAGAATGGAGCGAGCGATGAAATTTAAAAAACCTTTTTTGTTTAAGGGCGTGAAAAACAAAGCGTTCATGAGCATTTTTT
CCATGAAGCCTAGTAAAGAAATGGCTAATGACATCCACTTAAATCCAAACAGAGAAGACAGGCTTGTGAGCGCTGCAAAC
TCTTATCTAGCGAATAACTATGAATGTTTTTTAGATGATGGGGTGATCCTTACTAACAACTATTCTCTTTTAGGCACAAT
CAAATTGGGGGGCATTGATTTTTTAACCACTTCCAAAAAAGATCTCATAGAGTTACACGCTTCTATTTATAGCGTTTTTA
GGAATTTTGTTACCCCTGAATTCAAATTCTATTTTCACACTGTTAAAAAGAAAATCGTTATTGATGAAACCAATAGGGAC
TATGGTCTTATTTTTTCTAATGATTTTATGCGAGCCTATAATGAGAAGCAAAAGAGAGAAAGTTTTTATGATATTAGTTT
TTTTCTCACCATAGAGCAAGATTTATTAGACACTCTCAATGAACCCGTTATGAATAAAAAGCATTTTGCAGATAATAATT
TTGAAGAGTTTCAAAGGATTATTAGAGCCAAGCTTGAAAACTTCAAGGACAGGATAGAGCTCATAGAAGAGCTATTGAGT
AAATACCACCCCACTAGATTGAAAGAATACACCAAAGATGGCGTTATTTACTCCAAGCAATGCGAATTTTACAATTTTTT
GGTGGGAATGAATGAAGCCCCTTTTATTTGCAACCGAAAAGACTTGTATCTCAAAGAAAAAATGCATGGTGGGGTGAAAG
AAGTTTATTTTGCTAATAAGCATGGAAAAATCTTGAATGATGACTTGAGTGAAAAATATTTTAGCGCTATTGAGATCAGT
GAATACGCCCCTAAATCACAGAGCGATTTGTTTGATAAAATCAACGCTCTAGACAGCGAATTTATCTTTATGCATGCTTA
TTCGCCTAAAAACTCACAAGTTTTGAAAGACAAACTAGCTTTCACCTCTAGAAGAATTATTATTAGTGGAGGCTCTAAAG
AGCAGGGCATGACTTTAGGTTGCTTGAGCGAATTAGTGGGTAATGGTGATATTACGCTAGGCAGTTATGGTAATTCTTTA
GTGCTGTTTGCTGATAGCTTTGAAAAAATGAAACAAAGCGTTAAGGAATGCGTCTCTAGTCTTAACGCTAAAGGTTTTTT
AGCCAATGCAGCGACTTTCTCTATGGAAAACTACTTTTTTGCCAAACATTGCTCTTTTATCACGCTTCCTTTTATTTTTG
ATGTAACTTCTAATAATTTTGCTGATTTCATCGCTATGAGGGCTATGAGTTTTGATGGCAATCAGGAGAATAACGCTTGG
GGCAATAGTGTGATGACGCTAAAAAGCGAGATCAATTCGCCTTTTTATCTGAACTTCCACATGCCCACTGATTTTGGTTC
AGCTTCAGCAGGACACACTTTGATACTTGGCTCAACCGGTTCAGGTAAGACAGTGTTTATGTCAATGACTTTGAACGCTA
TGGGACAATTTGTTCACAATTTTCCTGCTAATGTCAGCAAAGACAAGCAAAAGCTCACTATGGTTTATATGGATAAAGAT
TATGGCGCTTATGGGAATATTGTCGCAATGGGTGGGGAGTATGTCAAGATTGAGCTAGGGACAGATACAGGATTAAATCC
TTTTGCTTGGGCGGCTTGTGTGCAAAAAACAAATGCAACAATGGAGCAAAAACAAACAGCTATTTCTGTTGTCAAAGAGC
TTGTGAAAAACTTAGTAACCAAAAGCGATGAAAAAGATGAGAATGGCAACAGCATCTCTTTTAGCCTAGCAGATTCTAAT
ACGCTTGCAGCGGCAGTAACCAACCTTATCACAGGAGATATGAACCTAGATTATCCCATCACTCAACTTATTAATGCTTT
CGGAAAAGACCACAATGATCCTAATGGGCTTGTCGCACGATTAGCGCCTTTTTGTAAATCAACCAATGGTGAATTTCAAT
GGCTTTTTGATAATAAAGCAACAGATCGCTTAGATTTTTCAAAAACGATTATTGGCGTTGATGGGTCAAGCTTCTTAGAC
AATAATGATGTTTCGCCTTTTATTTGTTTTTACCTTTTCGCTCGTATCCAAGAGGCAATGGATGGGCGTAGATTTGTCTT
AGATATTGATGAAGCTTGGAAATATTTAGGCGATCCAAAGGTCGCTTATTTTGTAAGAGACATGCTAAAAACTGCAAGGA
AAAGAAACGCTATTGTTAGGCTTGCGACTCAAAGTATCACTGATCTTTTGGCTTGCCCTATTGCTGATACGATTAGAGAA
CAATGCCCTACAAAGATTTTTTTGAGAAACGATGGGGGTAATCTTTCTGATTACCAAAGATTGGCTAATGTTACAGAAAA
AGAATTTGAAATCATCACTAAGGGACTAGATAGGAAAATTCTCTACAAACAAGATGGAAGCCCTAGCGTTATCGCTAGTT
TTAATTTGAGAGGCATTCCTAAAGAATATTTGAAAATTTTATCCACAGATACTGTATTTGTCAAAGAAATTGATAAGATT
ATCCAAAACCATAGTATTATAGATAAATATCAGGCCTTGAGGCAAATGTATCAACAAATAGAGGAGTATTAA
|
| Protein sequence : | |
MFVASKQADEQKKLIIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETFIYSSIFILFVTIVLSVILFQ
AYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFLFKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAAN
SYLANNYECFLDDGVILTNNYSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTVKKKIVIDETNRD
YGLIFSNDFMRAYNEKQKRESFYDISFFLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRIIRAKLENFKDRIELIEELLS
KYHPTRLKEYTKDGVIYSKQCEFYNFLVGMNEAPFICNRKDLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEIS
EYAPKSQSDLFDKINALDSEFIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNFADFIAMRAMSFDGNQENNAW
GNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSGKTVFMSMTLNAMGQFVHNFPANVSKDKQKLTMVYMDKD
YGAYGNIVAMGGEYVKIELGTDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLVTKSDEKDENGNSISFSLADSN
TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATDRLDFSKTIIGVDGSSFLD
NNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPKVAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIRE
QCPTKIFLRNDGGNLSDYQRLANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
IQNHSIIDKYQALRQMYQQIEEY
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