Name : cag7 (HP0527)
Accession : AAR03919.1
PAI name : cag PAI
PAI accession : AY330640
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : Cag7
Function : -
Note : cag-Y; jhp0476; orf13/14; virB10-like protein
Homologs in the searched genomes : 4 hits ( 4 protein-level )
Publication :
-Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Comparative analysis of the complete cag pathogenicity island sequence in four Helicobacter pylori isolates", Gene 328, 85-93 (2004) PUBMED 15019987.
-Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Direct Submission", Submitted (26-JUN-2003) Biotechnology, Royal Institute of Technology, Alba Nova University Centre, Roslagstullsbacken 21, S-106 91 Stockholm, Sweden.
| DNA sequence : | |
AAATTTTTAGCGAAGCAAGTGCTAAATTGTTTGGAAAAAGCTGGAAATGAAGAAGAAAGAAAAGCATGTCTTAAAAATCT
CCCTAAAGACTTACAGGAAAATGTTTTAGCTAAAGAGAGTCTTAAAGCTTATAAAGACTGCCTCTCTCAAGCTAGAAATG
AAGAAGAAAGGAGAGCTTGCGAGAAACTACTCACCCCTGAAGCGAGAAAACTCTTAGAGCAAGAAGTTAAGAAGAGCGTT
AAGGCTTATTTGGACTGCGTATCAAGAGCTAGGAATGAAAAAGAGAAACAGGAATGCGAGAAATTGCTCACCCCTGAAGC
GAGGAAATTTTTAGCGAAAGAACTCCAACAAAAAGATAAAGCGATCAAAGATTGCTTGAAAAACGCCGATCCTAACGACA
GAGCAGCTATCATGAAGTGTTTGGATGGTTTGAGCGATGAAGAGAAGCTCAAATACTTGCAAGAAGCTAGAGAAAAGGCT
GTCTTGGATTGTTTGAAAACGGCTAGGACCGATGAAGAAAAAAGGAAATGCCAAAACCTTTATAGCGATTTGATCCAAGA
AATTCAAAATAAAAGGACACAAAGCAAACAAAATCAATTGAGTAAAACAGAAAGATTGCATCAAGCAAGCGAGTGCTTGG
ATAACTTAGATGACCCTACCGATCAACAAGCCATAGAGCAATGTTTAGAGGGCTTGAGCGATAGTGAAAGGGCGCTAATT
CTAGGAATTAAACGACAAGCTGATGAAGTGGATCTGATTTATAGCGATCTAAGAAACCGCAAAACCTTTGATAACATGGC
GGCTAAAGGTTATCCGTTGTTGCCAATGGATTTCAAAAATGGCGGCGATATTGCCACTATTAACGCCACTAATGTTGATG
CGGACAAAATAGCTAGCGATAATCCTATTTATGCTTCCATAGAGCCTGACATTACCAAACAATACGAAACAGAAAAAACC
ATTAAGGATAAGAATTTAGAAGCTAAATTAGCTAAGGCTTTAGGTGGCAATAAAAAAGATGACGATAAAGAAAAAAGTGA
AAAATCCACAGCAAAAGCTAAAGCAGAAAGCAATAAGATAGACAAAGATGTCGCAGAAACTGCTAAGAATATCAGTGAAA
TCGCTCTTAAGAACAAAAAAGAAAAGAATGGGGAATTTGTAGATGAAAATGGTAATCCCATTGATGACAAAAAGAAAGCA
GAAAAACAAGATGAAACAAGCCCTGTCAAACAGGCCTTTATAGGCAAGAGTGATCCCACATTTGTTTTAGCGCAATACAC
CCCTATTGAAATCACTCTGACTTCTAAAGTAGATGCCACTCTCACAGGTATAGTGAGTGGGGTTGTAGCCAAAGATGTAT
GGAACATGAACGGCACTATGATCTTACTAGATAAAGGCACTAAGGTGTATGGGAATTATCAAAGCGTGAAAGGTGGCACA
CCTATTATGACACGCTTAATGATAGTTTTTACTAAAGCCATTACGCCTGATGGTGTGATAATACCTCTAGCAAACGCTCA
AGCAGCAGGCATGTTGGGTGAAGCAGGGGTAGATGGCTATGTGAATAATCACTTCATGAAGCGCATAGGCTTTGCTGTGA
TAGCAAGCGTGGTTAATAGCTTCTTGCAAACTGCGCCTATCATAGCTCTAGATAAACTCATAGGCCTTGGCAAAGGTAGG
AGTGAAAGGACACCTGAATTTAATTACGCTTTGGGTCAAGCTATCAATGGTAGTATGCAAAGTTCAGCTCAGATGTCTAA
TCAAATTCTAGGGCAACTGATGAATATCCCCCCAAGTTTTTACAAAAACGAGGGCGATAGTATTAAGATTCTCACAATGG
ACGATATTGATTTTAGTGGCGTGTATGATGTTAAAATTACCAACAAATCTGTGGTAGATGAAATTATCAAACAAAGCACC
AAAACCTTGTCTAGAGAACATGAAGAGATCACCACAAGCCCCAAAGGTGGCAATTAA
|
| Protein sequence : | |
KFLAKQVLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSV
KAYLDCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKA
VLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTERLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALI
LGIKRQADEVDLIYSDLRNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKT
IKDKNLEAKLAKALGGNKKDDDKEKSEKSTAKAKAESNKIDKDVAETAKNISEIALKNKKEKNGEFVDENGNPIDDKKKA
EKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGT
PIMTRLMIVFTKAITPDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGR
SERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQST
KTLSREHEEITTSPKGGN
|
|
