Name : HP0521B (HP0521B)
Accession : AAR03913.1
PAI name : cag PAI
PAI accession : AY330640
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : HP0521B protein
Function : -
Note : -
Homologs in the searched genomes : 3 hits ( 3 protein-level )
Publication :
-Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Comparative analysis of the complete cag pathogenicity island sequence in four Helicobacter pylori isolates", Gene 328, 85-93 (2004) PUBMED 15019987.
-Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Direct Submission", Submitted (26-JUN-2003) Biotechnology, Royal Institute of Technology, Alba Nova University Centre, Roslagstullsbacken 21, S-106 91 Stockholm, Sweden.
| DNA sequence : | |
ATGAGAGAAAATTTCAAAAATTTAGGCGTTGTAGTGGTTTATTACTCACTGCATGACCTACACAAGCAACCTATAAATTC
TTTTTCTCTAAAGACTTCTAATATCATAGGATTCTCTATTTTTATCTGCGAACACGCACAAAAAGAAATCATGCAAAAAG
TGGCTTCAAGACACACTGACAATTCAAATAAGTTCAACATCAAACCCAAAGAAAAGATTGATGAGAATGTCATTAACGCA
TTAGAGACAAGTTTGAAATCTAAAGGGGTCGTTTCAGAAACGCTAGAAAGTATCAAAGAAGCTAAAAACAACAAAGAGTA
TGAGAATTTGTCCAATAGGGGGTTTTTAAGGGCTAAATTAGATCAAGGGGTAGGGCTCAACTTTCAAGAGTCTATAGGCT
ACAACTTGAGCGCCCTACAAAAAAAGGCAATCTCTCTGTTAAAAATCAGCCCCAATCAGATATTAGAATTAGTCCAAAAA
CTATACATGAAAGGGCATATAAGCTATCCTACTGAATATTTGTTTGAAGAGACTTTCAAAAAAAACTTATATAAGATTTA
CAAGGACTCAGAGAATGATTGCTTCAACAAGAATGTGGCTGATGAAGAAAAAGTTCTTTTAGGGTTTCCTAACAGAAAAT
TCACTCCCAATGAGTTTTTTACAGCTACATCACTTACCTTAAATGCAATGGAATTTTGTCTCTATATCAATCTGAAAAAA
AAGGAAACTAATGTTTAG
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| Protein sequence : | |
MRENFKNLGVVVVYYSLHDLHKQPINSFSLKTSNIIGFSIFICEHAQKEIMQKVASRHTDNSNKFNIKPKEKIDENVINA
LETSLKSKGVVSETLESIKEAKNNKEYENLSNRGFLRAKLDQGVGLNFQESIGYNLSALQKKAISLLKISPNQILELVQK
LYMKGHISYPTEYLFEETFKKNLYKIYKDSENDCFNKNVADEEKVLLGFPNRKFTPNEFFTATSLTLNAMEFCLYINLKK
KETNV
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