Name : cag3 (HP0522)
Accession : AAR03885.1
PAI name : cag PAI
PAI accession : AY330638
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : Cag3
Function : -
Note : cag-delta; jhp0471; orf8
Homologs in the searched genomes : 46 hits ( 46 protein-level )
Publication :
-Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Comparative analysis of the complete cag pathogenicity island sequence in four Helicobacter pylori isolates", Gene 328, 85-93 (2004) PUBMED 15019987.
-Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Direct Submission", Submitted (26-JUN-2003) Biotechnology, Royal Institute of Technology, Alba Nova University Centre, Roslagstullsbacken 21, S-106 91 Stockholm, Sweden.
| DNA sequence : | |
ATGCAAGGGAATTTTGTCTCTATATCAATTCTGAAAAAAAGGAAACTAATGTTTAGAAAACTAGCAACCGCTGTATCGCT
CATAGGCTTACTAACCTCTAACACTCTTTATACTAAAGAAATAAGTGAAGCCGATAAGGTCATTAAGGCCACTAAAGAAA
CTAAAGAGACCAAGAAAGAAGCTAAACGACTCAAAAAAGAAGCTAAACAGCGCCAACAGATCCCTGATCATAAGAAACCT
CAATATGCCTCTGTTGATGACACAAAAACTCAAGCACTGTTTGATATATACGACACCTTGAATGTGAATGACAAAAGCTT
TGGGGATTGGTTTGGTAATAGCGCTTTGAAAGACAAAACCTATCTCTACGCTATGGATCTATTGGATTACAACAACTATT
TATCCATAGAAAACCCCATTATCAAAACAAGAGCAATGGGGACTTATGCGGATCTCATCATCATCACAGGTTCGTTAGAA
CAAGTCAATGGGTATTACAACATTCTAAAAGCGCTCAACAAACGAAACGCTAAGTTTGTGTTAAAAATCAATGAGAACAT
GCCTTATGCCCAAGCGACTTTTTTACGAGTGCCAAAAAGAAGCGATCCTAATGCCCACACGCTTGATAAGGGAGCGGCAA
TTGATGAGAACAAACTTTTTGAACAACAAAAACGCGCGTATTTCAACTACGCCAACGATGTGATCTGCAGACCCAATGAT
GAAGTGTGTTCGCCCCTAAGAGATGAAATGGTCGCTATGCCCACTAGCGATAGCGTTACTCAAAAACCCAATATCATTGC
TCCTTATAGCTTGTATAGACTAAAAGAGAAAAATAACGCCAATGAGGCCCAACCATCAGCCACTCAAACCGCTCCTGAAA
ACAGCAAAGAGAAGCTCATAGAAGAGCTAATCGCTAACTCCCAACTCATAGCCAATGAAGAAGAGAGGGAAAAGAAACTC
TTAGCAGAAAAAGAAAAACAAGAGGCTGAATTGGCTAAATACAAGCTCAAAGACTTAGAAAATCAAAAGAAACTAAAAGC
TTTAGAAGCAGAGTTGAAAAAGAAAAATGCTAAGAAACCTAGAGTAGTGGAAGTGCCTGTTTCTCCTCAAACAAGTAATT
CTGATGAAACAATGAGAGTTGTTAAAGAAAAAGAAAACTATAATGGGTTGTTAGTGGATAAAGAAACCACGATCAAAAGA
AGCTATGAGGGGACTTTGATCAGCGAAAATTCTTACAGCAAAAAAAGCCCTCTCAACCCTAATGACTTGAGGAGCTTAGA
AGAAGAAATTAAGAGCTACTATATCAAGTCTAATGGCTTGTGTTACGCTAATGGCATTAGCCTCTATGTAAAAATCAAAA
ATGATCCCTACAAAGAGGGAATGCTGTGTGGTTATGAGAGTGTTCAAAATCTGCTCTCACCACTAAAAGACAAGCTCAAA
TACGACAAGCAGAAGTTACAAAAAGCGTTACTGAAAGAGTCAAAGTAA
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| Protein sequence : | |
MQGNFVSISILKKRKLMFRKLATAVSLIGLLTSNTLYTKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPDHKKP
QYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSIENPIIKTRAMGTYADLIIITGSLE
QVNGYYNILKALNKRNAKFVLKINENMPYAQATFLRVPKRSDPNAHTLDKGAAIDENKLFEQQKRAYFNYANDVICRPND
EVCSPLRDEMVAMPTSDSVTQKPNIIAPYSLYRLKEKNNANEAQPSATQTAPENSKEKLIEELIANSQLIANEEEREKKL
LAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPVSPQTSNSDETMRVVKEKENYNGLLVDKETTIKR
SYEGTLISENSYSKKSPLNPNDLRSLEEEIKSYYIKSNGLCYANGISLYVKIKNDPYKEGMLCGYESVQNLLSPLKDKLK
YDKQKLQKALLKESK
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