PAI Gene Information


Name : cag11 (HP0531)
Accession : AAR03866.1
PAI name : cag PAI
PAI accession : AY330637
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : Cag11
Function : -
Note : cag-U; jhp0480; orf18
Homologs in the searched genomes :   45 hits    ( 45 protein-level )  
Publication :
    -Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Comparative analysis of the complete cag pathogenicity island sequence in four Helicobacter pylori isolates", Gene 328, 85-93 (2004) PUBMED 15019987.

    -Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Direct Submission", Submitted (26-JUN-2003) Biotechnology, Royal Institute of Technology, Alba Nova University Centre, Roslagstullsbacken 21, S-106 91 Stockholm, Sweden.


DNA sequence :
ATGAACGATACAACAGAGCATCATGGATCCAATCCGCTAAACGCTCCATCACCTAGCAACTCACAGAGTAACGATCTCTT
AAATTTGCTAGACTCGTTATATCCCAAAGGGAGTTTAGGGGAACAAAGATTTCACGAAGCTTTAAAGAATCAAGAAGAGT
TGAAAAATATCCTAATAGAAATAGAAAAGCTACCGCAAGAAAAAAGGTATGAACTTCTGATGCAGATAGGACAAGCCAAA
CAGAGAATAATGGAAGCATACGCTCATTCATTCTTAGGATATATAGGGGGACTAGAGCATCTGTTAGGATTATGTATGGG
TGGGATATTTGTTTTGTTTGCAATCTATTTTGTATTTTTAAGAACTAGCAAAAATGTGGATTTGGTGGAAAGTCTAAAAA
CAAAACTAAAACTTCAGTATTTTTACTATGCCTTTGGTGTAGGTGCGGTTTTGTTTTTTGGATTAGAAACAATTAGATCT
ATTTATGAACTGTATATATTAGGAATTGGTAGCACTAACGACAAGGTGCTCTTTGTTTTGAAAAACATTTGTTTCATAGG
CATGGGCTATTTGATTTATAAAGTTATTAAGGTTATTGGTATAAAAAATTTTATCAATGGTCTTTTCACTTCAAAGAAAC
AAGAGCAATAA

Protein sequence :
MNDTTEHHGSNPLNAPSPSNSQSNDLLNLLDSLYPKGSLGEQRFHEALKNQEELKNILIEIEKLPQEKRYELLMQIGQAK
QRIMEAYAHSFLGYIGGLEHLLGLCMGGIFVLFAIYFVFLRTSKNVDLVESLKTKLKLQYFYYAFGVGAVLFFGLETIRS
IYELYILGIGSTNDKVLFVLKNICFIGMGYLIYKVIKVIGIKNFINGLFTSKKQEQ