Name : cag3 (HP0522)
Accession : AAR03854.1
PAI name : cag PAI
PAI accession : AY330636
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : Cag3
Function : -
Note : cag-delta; jhp0471; orf8
Homologs in the searched genomes : 46 hits ( 46 protein-level )
Publication :
-Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Comparative analysis of the complete cag pathogenicity island sequence in four Helicobacter pylori isolates", Gene 328, 85-93 (2004) PUBMED 15019987.
-Blomstergren,A., Lundin,A., Nilsson,C., Engstrand,L. and Lundeberg,J., "Direct Submission", Submitted (26-JUN-2003) Biotechnology, Royal Institute of Technology, Alba Nova University Centre, Roslagstullsbacken 21, S-106 91 Stockholm, Sweden.
| DNA sequence : | |
ATGTTTAGAAAACTAGCAACCGCTGTATCGCTCATAGGCTTACTAACCTCTAACACTCTTTATGCTAAAGAAATAAGTGA
AGCCGATAAGGTCATTAAGGCCACTAAAGAAACTAAAGAGACCAAGAAAGAAGCTAAACGACTCAAAAAAGAAGCTAAAC
AGCGCCAACAGATCCCTGATCACAAGAAACCTCAATATGCCTCTGTTGATGACACAAAAACTCAAGCGTTGTTTGATATA
TACGATACCTTGAACGTGAATGACAAAAGCTTTGGGGATTGGTTTGGTAATAGCGCTTTGAAAGACAAAACCTATCTCTA
CGCTATGGATCTATTGGATTACAACAACTATTTATCCATAGAAAACCCCATTATCAAAACAAGAGCGATGGGGACTTATG
CGGATCTCATCATCATCACAGGTTCGTTAGAACAAGTCAATGGGTATTACAACATTCTAAAAGCGCTCAACAAACGCAAC
GCTAAGTTTGTCCTAAAAATCAATGAGAACATGCCTTATGCCCAAGCGACTTTTTTGAGAGTGCCAAAAAGAAGCGATCC
CAATGCCCACACGCTTGATAAGGGAGCGTCAATTGATGAGAATAAGCTTTTTGAACAACAAAAACGCATGTATTTCAACT
ATGCCAACGATGTGATCTGCAGACCCAATGATGAAGTGTGTTCGCCCCTAAGAGATGAGATGGTCGCTATGCCCACTAGC
GATAGCGTTACTCAAAAACCCAATATCATTGCTCCTTATAGCCTGTATAGACTAAAAGAGACAAATAACGCCAATGAGGC
CCAACCATCACCTTACGCCACTCAAACCGCTCCTGAAAACAGCAAAGAGAAGCTCATAGAAGAGCTAATCGCTAACTCCC
AACTCATAGCCAATGAAGAAGAGAGGGAAAAGAAACTCTTAGCAGAAAAAGAAAAACAAGAGGCTGAATTGGCTAAATAT
AAGCTCAAAGACTTAGAAAATCAAAAGAAACTAAAAGCTTTAGAAGCAGAGTTGAAAAAGAAAAATGCTAAGAAACCTAG
AGTAGTGGAAGTGCCTATTTCCCCTAAAACAAGTAATTCTGATGAAACAATGAGAGTTGTCAAAGAAAAAGAAAACTATA
ATGGGTTATTAGTGGATAAAGAAACCACGATCAAAAGAAGCTATGAGGGGACTTTGATCAGTGAAAATTCTTACAGCAAA
AAATCGCCTATCAACCCTAATGACTTGAGGAGCTTAGAAGAAGAAATCAAAAGCTACTACATCAAGTCTAACGGCTTGTG
TTACGCTAATGGCATCAGCCTCTATGCAAAAATCAAAAACGACCCCTATAAAGAGGGAATGCTGTGTGGTTATGAGAGCG
TTCAAAATCTGCTCTCACCTTTAAAGGACAAGCTCAAATACGACAAGCAAAAGTTACAAAAAGCGTTACTGAAAGATTCA
AAGTAA
|
| Protein sequence : | |
MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPDHKKPQYASVDDTKTQALFDI
YDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSIENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRN
AKFVLKINENMPYAQATFLRVPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS
DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEEEREKKLLAEKEKQEAELAKY
KLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNSDETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSK
KSPINPNDLRSLEEEIKSYYIKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSPLKDKLKYDKQKLQKALLKDS
K
|
|
