Name : Z1644
Accession : AAQ19140.1
PAI name : PAI I CL3
PAI accession : AY275838
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : putative ParB-like nuclease
Function : -
Note : similar to Escherichia coli O157:H7 EDL933 Z1644 gene encoded by AE005312
Homologs in the searched genomes : 302 hits ( 298 protein-level, 4 DNA-level )
Publication :
-Shen,S., Mascarenhas,M., Rahn,K., Kaper,J. and Karmali,M.A., "Direct Submission", Submitted (14-APR-2003) Laboratory for Foodborne Zoonoses, Health Canada, 110 Stone Road West, Guelph, Ontario N1G 3W4, Canada.
-Shen,S., Mascarenhas,M., Rahn,K., Kaper,J.B. and Karmali,M.A., "Evidence for a hybrid genomic island in verocytotoxin-producing Escherichia coli CL3 (serotype O113:H21) containing segments of EDL933 (serotype O157:H7) O islands 122 and 48", Infect. Immun. 72 (3), 1496-1503 (2004) PUBMED 14977955 REMARK Erratum:[Infect Immun. 2004 Jul;72(7):4330. Karmal MA [corrected to Karmali MA]].
| DNA sequence : | |
ATGGGGGATTCTGTGACACCGGAGATACTTGGCAACATGATTCGTCAGTACTTCAGCCAGGAACGAGCAGAAGAAGAGAC
TATACAGGCCCTGAATCACCTGCGCAGGGTGCTTCATGAGGTCAGCCCTTTTGCGCAGGAGCCTGTGGACTGTGTGCTGT
GGGTGAAAGCGGATGAAGTGGTGGCCAACGATTACAATCCCAATGTCATGGCGCCGGGTGAGAAGAAACTGCTGAAGCAG
TCACTGGAGAAAGATGGTTTCACACAACCGGTGGTGGTGTCTGAGGAAAAGAACCATTACCTGGTGGTGGATGGTTTTCA
TCGCCAGGTGCTGGGCAGGGAAGCAGGTACGGGAAAACGTTTGAAGGGCTGGCTGCCGGTGGTCTGTATTAATCCGGAGA
GAAAGGGACAGGCCTCACGTATTGCTGCGACCATCCGACATAACCGGGCCAGGGGCAAACATCAGATAACCTCAATGTCT
GATATTGTCAGGGACCTGTCACGCCTGGGCTGGACGGATGAACGCATTGGTACAGAGCTGGGGATGGACCAGGATGAAGT
GCTGAGGCTGAAACAGATTAGCGGACTGACGGAGTTGTTTCAGGAAGAGGATTTCAGCCCGGCATGGACGGTTCGCTGA
|
| Protein sequence : | |
MGDSVTPEILGNMIRQYFSQERAEEETIQALNHLRRVLHEVSPFAQEPVDCVLWVKADEVVANDYNPNVMAPGEKKLLKQ
SLEKDGFTQPVVVSEEKNHYLVVDGFHRQVLGREAGTGKRLKGWLPVVCINPERKGQASRIAATIRHNRARGKHQITSMS
DIVRDLSRLGWTDERIGTELGMDQDEVLRLKQISGLTELFQEEDFSPAWTVR
|
|
