Name : S7
Accession : AAQ19130.1
PAI name : PAI I CL3
PAI accession : AY275838
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : putative transposase-like factor
Function : -
Note : similar to Pseudomonas syringae transposase encoded by GenBank Accession Number AAB81642
Homologs in the searched genomes : 11 hits ( 11 protein-level )
Publication :
-Shen,S., Mascarenhas,M., Rahn,K., Kaper,J. and Karmali,M.A., "Direct Submission", Submitted (14-APR-2003) Laboratory for Foodborne Zoonoses, Health Canada, 110 Stone Road West, Guelph, Ontario N1G 3W4, Canada.
-Shen,S., Mascarenhas,M., Rahn,K., Kaper,J.B. and Karmali,M.A., "Evidence for a hybrid genomic island in verocytotoxin-producing Escherichia coli CL3 (serotype O113:H21) containing segments of EDL933 (serotype O157:H7) O islands 122 and 48", Infect. Immun. 72 (3), 1496-1503 (2004) PUBMED 14977955 REMARK Erratum:[Infect Immun. 2004 Jul;72(7):4330. Karmal MA [corrected to Karmali MA]].
| DNA sequence : | |
ATGCGCAGCTGTACGTTACTGGACAAAATGTACGCGCTTGGAGTATTAAGTTCTTATTTTCGTCCCCGGGTTAGCAATGA
TAACCCTTATTCCGAATCGCTCTTCCGGACGATTAAGTATTGTCCATGGTGGCCAGAGAATGGTTTTCGAACCATAGATG
AAGCCAGAAGTTGGTTAAGCAGGTTCACGCGATGGTACAACCTGGAACACAAGCACAGCGGTATTAAGTATGTTACTCCG
GATGAACGCCATCGCGGAATTGATGCACAAATACTGGAAGCCAGAAAAACAGTTTATCGCGGAGCACACAAACGTCATCC
TGAGCGCTGGAGCAAACAGTTACGTGACTGGGAACTCATTCAGGCAGTTTATCTAAATCCAGAAAAAGAAGCGGCATAA
|
| Protein sequence : | |
MRSCTLLDKMYALGVLSSYFRPRVSNDNPYSESLFRTIKYCPWWPENGFRTIDEARSWLSRFTRWYNLEHKHSGIKYVTP
DERHRGIDAQILEARKTVYRGAHKRHPERWSKQLRDWELIQAVYLNPEKEAA
|
|
