Name : unnamed
Accession : AAQ03233.1
PAI name : NGPAI
PAI accession : AF411857
Strain : Neisseria gonorrhoeae FA 1090
Virulence or Resistance: Not determined
Product : unknown
Function : -
Note : similar to the Escherichia coli F plasmid inner membrane protein TraC encoded by GenBank Accession Number U01159
Homologs in the searched genomes : 1 hits ( 1 protein-level )
Publication :
-Urvil,P.T., Hart,A., Nguyen,K., Das,M., Kurosky,A., Smith,J., Nowicki,B.J. and Nowicki,S., "A pathogenicity island from PID isolate of Neisseria gonorrhoeae", Unpublished.
-Urvil,P.T., Hart,A., Nguyen,K., Das,M., Kurosky,A., Smith,J., Nowicki,B.J. and Nowicki,S., "Direct Submission", Submitted (22-AUG-2001) Obstetrics and Gynecology, The University of Texas Medical Branch, 301 University Boulevard, Galveston, TX 77555-1062, USA.
| DNA sequence : | |
ATGGGCGTCCTGTCAAAATTTAAAAATTGGTTGGCCGGTTCGGATGATGTCGATCAACCGATGGAAGCCTTGCACAACAA
CCCTGTCGATCCTGACTTTGACCATTTGAGCGACTATCTCAATTACGGTGCATACGATACCAAAACAGAGTTGTTTACGC
TGATGTCCGTTAAAGGCGACAAACCGTTGGGCATGGGCTTTATTCTGGAACTTAACCCATTTTTAGGCGGCAGTGACGAC
CTGATCGGTAAGTGGGGCAGCCTGTATGCGCTGCTTCCTGAAAAGACGCCGATACAGGTTCAAATTTTCGGCTCCCCCGA
TTTAAGAAATTACTTCAAGGAATATGAGCAAGTACAAGCATCACGACCTATAGACGATCCGATGCGAAGCACTTTCGAAA
CTTTGGCCAAAAAACGTACTGAATTTTGGAATAAGGGTACACAGAAGGTCTTGGTAGAAAATACGGCCATTCGTTTACGA
AATCTGCGCTGTATCCTCAGCGTAAATTTGAATATTCCACCTGATAATGCAGTGGAAGTCAGCAAGGCGGTTTCGCTCCT
TGCCCGCATGCGCGATTCACTCCGCTCCATGCAGATTTACGGCCGAACTTGGAATGCAGACGATTTATTGGCTTGGACAA
CGCTCCTACTCAACCCTAATAGGATGTTTACCGGACAACAAGATGAAATCGATCCTGTTTGGGATGAAACCAAGTTCTTG
AGTGAACAAATGATTGAGACCCGCACATCTATCAAGGTTCTTGATAGCGGCTCGGGGCTGCGTTTTGGCAACCGTGCCGC
GGGGGATTGCGTGATTGCTCAATGCTATTCTGCCAATCGCTACCCTGAAGAGTTTCATCTGTCCAATATGGGCGCATTGA
TTGGTGATGTCATTGAGGCAAACATGAATTACACATCACCATTTCTGATTTCCATGGCGATGTTCAAGCGTGATTATGAC
ACTTCCAGCAATACCGTAAAACTGAAAGCGGCCCGCGCCAAACAAACGGCGGAATCCAAGATGGCCGCAGTTATGCCGGA
GGCAGCAAAAATCAAACGTGATTACGACATATGCCTAGAAGCGTTCGGCAAAGGCGGCGGCGGTCTGGTGAGTTTGTTGC
ACCAAGTTGTCATTTGGGAGCGTCCCGAAAACATTAACTTGGCTGAAAGCCAGGCGGTATCGATTTGGCAGGCTCAGGGC
TTCGGTCTTTATCGTGACCAATATCTTCAACTGGGGTCATATTTGACTGCCCTCCCAATGGCTATCGACAAAGAGGTTGA
NAAATATTTGGACAGTAAGAAAAGATGGTCAACCAAAACCATGACTAATGCTGTCTGTATGTCTCCCGTTATCGGCGAGT
GGCACGGTTTAGGAAGACCTGTCATCGGTTTGTTCGGAAAACGCGGGCAGGCCATGGGAATCGACTTATTTGCCAACCCG
GCAGGTAACTATAACTTTGCCATTATTGGCGCTTCCGGTTCCGGCAAATCATTTTTTGCCAATGAAATTGTGCGCAACTA
CATGGGGCTGGGGACTCAGGTATGGATTATCGACGTTGGCCGTTCGTATGAAAAATTCTGCCAAATGATTGGCGGGCAGT
ATATTGAATTTACCTATGAAGCAGGCCTGTGCTTCCCGCCATTCCAAATGGTAACGGACATCAACGAAGATATTGAGATG
TTGAAACTAATCTTCTCATTGATGGCCTCTCCGTCAGACTCCCTAACGGAACAGCAGGAAGCCAAGCTTCAACGGATAAT
CGAAGAAGTATGGTACGAATTCGGACAAGAAGGCACGGTCGATCATGTAAGGGAACGCTGTCTCAAGTGTTTGATTACCG
GCAGTAATGAAGGAGGAAAGCCCGGTGAACGAGATTTGTCTATGGTGGCCGTTGCCGACCAATTGTACACATACTGTTCG
GAAGGTATCTACGGCAGTTACTTCAATGGAAAATTGAATGTCGAGTTTAAAAATGACCTGGTCGTACTGGAACTTGAAGA
GTTAAAAACCAAACCGGATCTGCAACAGATCATCATGCAGCTGATTATGTACCGCATTATGCAGGGCATGTACCTATCAC
GAAGCCAGTACAAAATTATGATGATTGACGAGGCTTGGGCTTTGTTGGGCGACACGGGTACAGCCGCTCGTTTTATTGAG
GAAGGCTACCGCCGTGTCCGTAAGTACAAAGGTGCATGCGGCACTCTGACGCAAGGTGCAAATGACTACTACAAGACTAA
GGCGGCTGAGGCGGCATTAGAGAATGCCGACTTTGTTTTCCAATTGCGTACCGGGGCTAAATCGCTCAAAACCATTCAAG
ACAAAGAACCTTTTGAAGTCAATGACGGGATTATGCAGATTCTGCGAACTTTGAGCAAAACTGACTACTACAGTGAAATA
TTTGTCTCTACCCCGATAGGTTATGGAGTAGGTAGGTTGTACTCGGACCCATTCAACGTTCTTGCCTCAAGCTCAAAAGC
GGAAGACGTTGAAGCCGTGAACCATTACAGAAATCAGGGGTTGAATACAGCCGAGGCCATTGAAGCAGTTTTAAGGGACC
GTGCCGCAACCCGCTAA
|
| Protein sequence : | |
MGVLSKFKNWLAGSDDVDQPMEALHNNPVDPDFDHLSDYLNYGAYDTKTELFTLMSVKGDKPLGMGFILELNPFLGGSDD
LIGKWGSLYALLPEKTPIQVQIFGSPDLRNYFKEYEQVQASRPIDDPMRSTFETLAKKRTEFWNKGTQKVLVENTAIRLR
NLRCILSVNLNIPPDNAVEVSKAVSLLARMRDSLRSMQIYGRTWNADDLLAWTTLLLNPNRMFTGQQDEIDPVWDETKFL
SEQMIETRTSIKVLDSGSGLRFGNRAAGDCVIAQCYSANRYPEEFHLSNMGALIGDVIEANMNYTSPFLISMAMFKRDYD
TSSNTVKLKAARAKQTAESKMAAVMPEAAKIKRDYDICLEAFGKGGGGLVSLLHQVVIWERPENINLAESQAVSIWQAQG
FGLYRDQYLQLGSYLTALPMAIDKEVXKYLDSKKRWSTKTMTNAVCMSPVIGEWHGLGRPVIGLFGKRGQAMGIDLFANP
AGNYNFAIIGASGSGKSFFANEIVRNYMGLGTQVWIIDVGRSYEKFCQMIGGQYIEFTYEAGLCFPPFQMVTDINEDIEM
LKLIFSLMASPSDSLTEQQEAKLQRIIEEVWYEFGQEGTVDHVRERCLKCLITGSNEGGKPGERDLSMVAVADQLYTYCS
EGIYGSYFNGKLNVEFKNDLVVLELEELKTKPDLQQIIMQLIMYRIMQGMYLSRSQYKIMMIDEAWALLGDTGTAARFIE
EGYRRVRKYKGACGTLTQGANDYYKTKAAEAALENADFVFQLRTGAKSLKTIQDKEPFEVNDGIMQILRTLSKTDYYSEI
FVSTPIGYGVGRLYSDPFNVLASSSKAEDVEAVNHYRNQGLNTAEAIEAVLRDRAATR
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