Name : RL022 (RL022)
Accession : AAP84149.1
PAI name : PAPI-1
PAI accession : AY273869
Strain : Pseudomonas aeruginosa B136-33
Virulence or Resistance: Not determined
Product : conserved hypothetical protein
Function : -
Note : similar to PSPTO0859 in Pseudomonas syringae pv. tomato DC3000
Homologs in the searched genomes : 141 hits ( 141 protein-level )
Publication :
-He,J. and Rahme,L.G., "Direct Submission", Submitted (09-APR-2003) Department of Surgery and Department of Molecular Biology, Massachusetts General Hospital and Boston Shriners Institute, Harvard Medical School, 55 Fruit Street, Boston, MA 02114, USA.
-He,J., Baldini,R.L., Deziel,E., Saucier,M., Zhang,Q., Liberati,N.T., Lee,D., Urbach,J., Goodman,H.M. and Rahme,L.G., "The broad host range pathogen Pseudomonas aeruginosa strain PA14 carries two pathogenicity islands harboring plant and animal virulence genes", Proc. Natl. Acad. Sci. U.S.A. 101 (8), 2530-2535 (2004) PUBMED 14983043.
| DNA sequence : | |
ATGGGCTTTTTTCAAACCCTTCTGCGCGGTCGCACACAGCCTCAGTCGGTACCGGCAGACGCTCCCGAAGATTCAGGAGC
GCTGGACGTAGCGGCCGCGGAAGAAGCGACTGAGCGCTATCTGGCGCGACTGGCCGCCATGGGTATTCCTCTGCCCAACA
CCGGGAGCAAGAATGGCGCCACGCAGGCCGAAGCGTCACGCCTCTACGATCACGACCCATCGTTCGTAGACCTGCTGCCC
TGGGCTGAGTACCTGCCCGACGAGCAAGTGATGCTCCTGGAGGATGGGCGTTCGCGCGCCGCATTCTTCGAACTGGTGCC
CTTGGGCACCGAGGGCCGCGATCCCAATTGGATGCAGAACGCCCGGGACGCATTGAAAGAAGCCCTGCAGAACTCCTTCG
ACGAGCACGAAACCTCACCCTGGATTGTCCAGTTCTACGCCCAGGACGAGATCAGCTGGGACAATTTCCAGGAGCAGTTG
AGGCAGTACGTCCATCCTCGAGCGCGAGGATCGGCCTTCAGCGAGATGTACCTGGCGCTCATGAAGCATCACCTGGAGGG
CATTTCGAAGCCGGGCGGACTGTTCGTCGACACCGCCGTCAGCAAGCTGCCCTGGCGAGGACAACAGCGCCGCGTGCGGA
TGGTCGTCTACCGCCGGATCCGCAAGGAGGATGCGCAGATTCGCGGACAGGACCCGGCGGCGTACCTGAAATCCATCTGC
GAGCGTATCCAAGGCGGCCTGGCGAACGCCGGCATCGTCGCTTCGCGCATGGGCGGACAGGAGATCAGGAACTGGTTGAT
CCGCTGGTTCAACCCGCACCCGGATCACCTCGGCCAGGCCGAGGCGGACCTACGTCGCTTCTACGAACTGGTATGCCGTC
CGGACGAACCGATCCTGCAGGATGAATTGCCACTGGCCGACGGCACTGACTTCTCCCAGAACCTGTTCTATCGGCAGCCT
GTTTCCGATGCCACCCAGGGCGTATGGCTCTTCGATGCCATGCCGCACCGAGTGATTGTGGTCGACCAGTTGAACAAAGC
GCCGCTGACAGGCCACTTCACCGGCGAGACGCTCAAAGGCGATGGCCTCAACGCCCTGTTCGATCGAATGCCCGAGGACA
CGCTGCTGTGCATCACCATGGTCGTGACGCCGCAGGACATGCTGGAAGGGCATCTGCAGCAGCTCTCGAAAAAGGCCGTT
GGTGACACCCAGGCCTCGATCCACACCCGCGAGGACGTGGCCACCGTTCGACGCCTGATCGGCCGGGAGCACAAGCTCTA
TCGCGGAGCGATCGCTCTGTTCGTGCGCGGCCGCGACCATACCCAGTTGGAGGAACGCTGCATCACCCTGAGCAACGTAC
TGCTCGGCGCCGGCCTGGTGCCGGTCGAACCGCAGAACGAAGTCGGACCGCTGAACAGCTACCTGCGCTGGCTCCCCTCA
AACTTCGATCCAAACGAGAAGCGAGCCCTGGAGTGGTACACCCAGATGATGTTCGCTCAGCACATCGCCAACCTGTCGCC
CATCTGGGGGCGCACCACCGGTACCGGACACCCTGGCTTCACGCTGTTCAACCGTGGCGGCGCGCCGTTGACCTTCGACC
CGTTCAACAAGCTGGACCGGCAGATGAATGCCCACGGCTTCATCTTCGGGCCAACTGGCTCCGGCAAGTCGGCGTCCCTG
ACCAACCTCATCTGCCAGATGCTCGCCATGTACCTGCCGCGGATGTTCGTCGCGGAAGCGGGCAACAGCTTCGGCCTGCT
GGCCGACTTAGCCAAGCGGTTTGGCCTCTCGGTCCACCGGGTGCGCCTCGCCCCGGGCTCCGGCGTCAGCCTGGCGCCGT
TCGCGGACGCCATCAAGCTGGTCGAGAGCCCCGACCAAGTGAAGGTGCTGGACGCCGAAGACATCGAGGCCTCGGACTCG
GTCCAGGGCAGCAAGGCCGACCTCGAGGACGACCAGCGAGACATCCTGGGCGAGATGGAGATCGTCGCCCGCCTCATGAT
TACCGGTGGCGAAGAGAAGGAAGATGCGCGCCTGACCCGTGCCGATCGCAGCGCCGTCCGCCAGGCGATCCTGGCGGCGG
CCAGGACCTGCGCCGCCGCGAACCGCACGGTACTGACCCAAGACGTGCGCGATGCGCTCTACGAGGCCTCCAGGAGCGAT
AGCACCGCGCCAGAACGCCGCGCGCGGATCGCCGAAATGGCGGAAGCCATGCAGATGTTCTGCATGGGCGCCGACGGCGA
GATGTTCAATCGCGAAGGCACGCCCTGGCCTGAGGCCGACCTTACCGTGGTGGATTTCGCAACGTACGCGCGCGAAGGCT
ACGCCGCCCAGCTCGGGATCGCCTACATCTCGCTGCTGAACACCGTGAACAACATCGCCGAACGCGACCAGTTCAAGGGC
CGGCCAATCGTCAAGATCACCGATGAGGGGCACATCATCACCAAGCACCCGCTGCTGCTGCCCTACGCCATGAAGATCAC
CAAGATGTGGCGGAAACTGGGCGCCTGGTTCTGGCTCGCCACCCAGAACATCGACGACATCCCAGCCTCCGGGGCGCCGA
TGCTGAACATGATCGAGTGGTGGTTGTGCCTGAACATGCCCCCCGACGAAGTAGAGAAGATATCCAGGTTCCGCGAGCTG
TCGCCGGCGCAGAAGTCGATGATGCTCTCGGCCCGCAAGGAAAGCGGCAAGTTCACCGAGGGCGTGCTCCTGGCCAAGGG
CAAAGAATACCTCGTCCGTGTGGTTCCCCCGAGTCTCTACCTGGCCCTGGCCATGACCGAAAACGAAGAAAAGAACCAGC
GCTACAACATCATGCAAGCCACCGGCTGCGACGAGCTCGAGGCGGCCTTGCAGGTCGCAGCGGATCTCGACAAGGCGCGC
GGCCTGCCACCCTTCCCCATTGTTTTCCCAGACCAACCGGCAGTGGAGTGCCAGGACGAATGA
|
| Protein sequence : | |
MGFFQTLLRGRTQPQSVPADAPEDSGALDVAAAEEATERYLARLAAMGIPLPNTGSKNGATQAEASRLYDHDPSFVDLLP
WAEYLPDEQVMLLEDGRSRAAFFELVPLGTEGRDPNWMQNARDALKEALQNSFDEHETSPWIVQFYAQDEISWDNFQEQL
RQYVHPRARGSAFSEMYLALMKHHLEGISKPGGLFVDTAVSKLPWRGQQRRVRMVVYRRIRKEDAQIRGQDPAAYLKSIC
ERIQGGLANAGIVASRMGGQEIRNWLIRWFNPHPDHLGQAEADLRRFYELVCRPDEPILQDELPLADGTDFSQNLFYRQP
VSDATQGVWLFDAMPHRVIVVDQLNKAPLTGHFTGETLKGDGLNALFDRMPEDTLLCITMVVTPQDMLEGHLQQLSKKAV
GDTQASIHTREDVATVRRLIGREHKLYRGAIALFVRGRDHTQLEERCITLSNVLLGAGLVPVEPQNEVGPLNSYLRWLPS
NFDPNEKRALEWYTQMMFAQHIANLSPIWGRTTGTGHPGFTLFNRGGAPLTFDPFNKLDRQMNAHGFIFGPTGSGKSASL
TNLICQMLAMYLPRMFVAEAGNSFGLLADLAKRFGLSVHRVRLAPGSGVSLAPFADAIKLVESPDQVKVLDAEDIEASDS
VQGSKADLEDDQRDILGEMEIVARLMITGGEEKEDARLTRADRSAVRQAILAAARTCAAANRTVLTQDVRDALYEASRSD
STAPERRARIAEMAEAMQMFCMGADGEMFNREGTPWPEADLTVVDFATYAREGYAAQLGIAYISLLNTVNNIAERDQFKG
RPIVKITDEGHIITKHPLLLPYAMKITKMWRKLGAWFWLATQNIDDIPASGAPMLNMIEWWLCLNMPPDEVEKISRFREL
SPAQKSMMLSARKESGKFTEGVLLAKGKEYLVRVVPPSLYLALAMTENEEKNQRYNIMQATGCDELEAALQVAADLDKAR
GLPPFPIVFPDQPAVECQDE
|
|
