Name : RL009 (RL009)
Accession : AAP84136.1
PAI name : PAPI-1
PAI accession : AY273869
Strain : Pseudomonas aeruginosa B136-33
Virulence or Resistance: Not determined
Product : pathogenesis-related protein
Function : -
Note : contains a RGD motif; similar to PA1539 in Pseudomonas aeruginosa PA01
Homologs in the searched genomes : 8 hits ( 8 protein-level )
Publication :
-He,J. and Rahme,L.G., "Direct Submission", Submitted (09-APR-2003) Department of Surgery and Department of Molecular Biology, Massachusetts General Hospital and Boston Shriners Institute, Harvard Medical School, 55 Fruit Street, Boston, MA 02114, USA.
-He,J., Baldini,R.L., Deziel,E., Saucier,M., Zhang,Q., Liberati,N.T., Lee,D., Urbach,J., Goodman,H.M. and Rahme,L.G., "The broad host range pathogen Pseudomonas aeruginosa strain PA14 carries two pathogenicity islands harboring plant and animal virulence genes", Proc. Natl. Acad. Sci. U.S.A. 101 (8), 2530-2535 (2004) PUBMED 14983043.
| DNA sequence : | |
ATGAAGTTACAGGCATATCGGCTGCAGAACTACCGCCGGCTGCGCGATGTTGTCATCGAGCTCGATGACGAAATTTCTAT
CTTTGTCGGTGCCAACAACAGCGGGAAGACATCCGCCGTCCAAGGCCTGTACTCAATGCTTCGCGGCGAAGTGAAGAAGT
TCGAGCTCTTTGACTTCAGTGCGGCGCTGTGGGCCGAGATCGATGCGGTCGGCAGGACGCCCCCTGGCGATGAGGATGCG
CCCAAAAGGTTACCGTCCATACTCTTGGATCTCTGGTTCCGCGTCGGTGAAGACGACCTCGCCACTGCGATGTCGCTGCT
GCCGAGCACTGAGTGGGACGGCAAGTGCGTCGGGATCCGGGTAGCGTTCGAGCCTCGGGATGCCCACGAGCTCGTCTGGA
AGTTCCATGAACTACATGAGAAGGCCAACAACGCAGCTGTCGCGCTTGCGGCCAAGCGCAAGGCCGCCGGGGAGCAAGCT
GTGGAGGCGGGCGCGGAAGACGCGGCTGCGGTGGTGGCCGATGCCGGCGAGTACAAGCCTTGGCCAGAAAGCCTGACGAA
GTACCTCACAAAGGAACTGAGCAAGGAATACACCTTCCGCTACTACGTGCTCGATGAGCGGGCTTTTGTCGGCTATCAGG
CAAGGGAGGCCGACTACGAGCCGCTACCCCTAGGCAAGGAGCCGGGCGGTGCAGCCATTCTCAAGTCGCTGGTGAGGGTC
GACTTCCTGCGCGCGCAGCGGCACCTCGATGACCCAGATGCCGGTAGCTCTGATCGCGCAGAGAGCTTGTCGCGGCGTCT
GAGCAGGTTCTATCACCGCAACCTGGAGAAGCGTGGCGACGACCATGCGGCTCTCAAGGCGCTAGATACCTCGGAGAAGG
AGCTGAACTTCCACCTGAAGGAAGTCTTCAATGACACCCTCACGCGCCTGGCCAAGCTCGGCTATCCGGGCGTCAACAAT
CCGGAGATCGTGATTCGGGCGGCCTTGGATCCGACCACTGTCTTGGGGCAAGACGCCAAGGTTCACTACGTGATCCCGGG
CGTAGCTTCCGCCCAACTGCCAGACAGCTACAATGGCCTGGGGTTCAAGAATCTGGTCTACATGGTGGTTGAGCTGCTCG
ACTTGCACGAGCAGTGGAAAGCCGAGGATGACAAGCGAGCTCCGCTTCATTTGGTCTTCATTGAGGAGCCTGAGGCGCAT
CTGCACGCGCAGATCCAGCAGGTCTTCATCAGGAACGTTTTGCGCCTCCTTGAGGATGCTAACGATCACGCGACTTTGTT
CCACACGCAGCTCGTCATCACCACGCACTCCCCGCACATCCTCTATGAACGCGGATTCTCGCCCATTCGGTACTTCCGCC
GCGTCAACGACCAGTTGGGCCATCACACGGATGTGCGCAATCTGTCGCTATTCAAAACGGGCGCGTCCGACGCTCCAGCG
CGCGAATTCCTGCAGCGGTATCTGAAGCTGACGCACTGCGATCTCTTTTTTTCCGACGCGGTGATATTGGTGGAAGGCAA
CGTCGAGCGTCTGCTCCTGCCTGCAATGATCGAGTTGGTGGCCAAGCGCCTGCGTTCTTCCGCCCTAACCATCCTTGAAG
TCGGTGGTGCGTTCGCGCATCGGTTCCAGGAGCTGATCGCCTTCGTTGGGCTCACAACACTGGTCATCACGGATCTGGAC
AGCGTGACGGTCAAGACGGACGCCGAGAAGGCCGCCGCGCAAGGCGCAGGCGCTGAGGGCGCCGTTGACGGAGATGACGA
GGACGAGGACGACGACCTGAAGCCCTTCGAGCTTGAAGACGACGACGAAGCAGAACCGAGTGGCAAGAAGAAGTCCAAGA
AGCGTGGCAGCACCTGCCATGCACACGTGGAAGGTGCCGTCACGTCCAACCAAACCCTCATCAGCTGGATCCCGAAGAAG
CGGTCGATGGCAGAGCTCTGGGAAGTCACGGCGGAGCAAAAGACGCTGTCGCTGGCTGAGGATTCCAGCGCTGGGGTTCG
GGTAGCTTACCAGACCAAGGTTTCGGTGACGGTGGGTGCGACGACATCACAGCTCTGCGGCCGCACACTTGAGGAGGCCT
TTGGTCTTGAGAACGCGGACTGGTGCCAGGCTGAGGCAAACCGGTCGGTCGGCCTCAAGCTCAAGCGCGCACCGAGCAGC
CCTGAAGAGCTGGCTGAGAAGTTACACGATAGGGTGGTCGGCAAGAACTTCGACAAGACCCGCTTTGCGCTGGAGGTACT
CGCAAGCGGGCCGCTCAATGGCTGGAAGGTTCCCGCGTACATCGCCGAGGGCTTGGCCTGGCTCGAAGCCAAAGTGGCCC
ACGAGCTTGAGGCGGATGCTGCCATCGCCACCGAGGTCGCGACTATTGAGCCGACTACAGCCGATGTTGTCGCTATCATT
GTTGACCCGGGGCAGACGGCATGA
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| Protein sequence : | |
MKLQAYRLQNYRRLRDVVIELDDEISIFVGANNSGKTSAVQGLYSMLRGEVKKFELFDFSAALWAEIDAVGRTPPGDEDA
PKRLPSILLDLWFRVGEDDLATAMSLLPSTEWDGKCVGIRVAFEPRDAHELVWKFHELHEKANNAAVALAAKRKAAGEQA
VEAGAEDAAAVVADAGEYKPWPESLTKYLTKELSKEYTFRYYVLDERAFVGYQAREADYEPLPLGKEPGGAAILKSLVRV
DFLRAQRHLDDPDAGSSDRAESLSRRLSRFYHRNLEKRGDDHAALKALDTSEKELNFHLKEVFNDTLTRLAKLGYPGVNN
PEIVIRAALDPTTVLGQDAKVHYVIPGVASAQLPDSYNGLGFKNLVYMVVELLDLHEQWKAEDDKRAPLHLVFIEEPEAH
LHAQIQQVFIRNVLRLLEDANDHATLFHTQLVITTHSPHILYERGFSPIRYFRRVNDQLGHHTDVRNLSLFKTGASDAPA
REFLQRYLKLTHCDLFFSDAVILVEGNVERLLLPAMIELVAKRLRSSALTILEVGGAFAHRFQELIAFVGLTTLVITDLD
SVTVKTDAEKAAAQGAGAEGAVDGDDEDEDDDLKPFELEDDDEAEPSGKKKSKKRGSTCHAHVEGAVTSNQTLISWIPKK
RSMAELWEVTAEQKTLSLAEDSSAGVRVAYQTKVSVTVGATTSQLCGRTLEEAFGLENADWCQAEANRSVGLKLKRAPSS
PEELAEKLHDRVVGKNFDKTRFALEVLASGPLNGWKVPAYIAEGLAWLEAKVAHELEADAAIATEVATIEPTTADVVAII
VDPGQTA
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