Name : RL008 (RL008)
Accession : AAP84135.1
PAI name : PAPI-1
PAI accession : AY273869
Strain : Pseudomonas aeruginosa B136-33
Virulence or Resistance: Not determined
Product : pathogenesis-related protein
Function : -
Note : similar to DNA helicase UvrD in Pseudomonas aeruginosa PA14 and to PA1935 in Pseudomonas aeruginosa PA01
Homologs in the searched genomes : 12 hits ( 12 protein-level )
Publication :
-He,J. and Rahme,L.G., "Direct Submission", Submitted (09-APR-2003) Department of Surgery and Department of Molecular Biology, Massachusetts General Hospital and Boston Shriners Institute, Harvard Medical School, 55 Fruit Street, Boston, MA 02114, USA.
-He,J., Baldini,R.L., Deziel,E., Saucier,M., Zhang,Q., Liberati,N.T., Lee,D., Urbach,J., Goodman,H.M. and Rahme,L.G., "The broad host range pathogen Pseudomonas aeruginosa strain PA14 carries two pathogenicity islands harboring plant and animal virulence genes", Proc. Natl. Acad. Sci. U.S.A. 101 (8), 2530-2535 (2004) PUBMED 14983043.
| DNA sequence : | |
ATGAGCAGACGAATTGATAGCCCAGATACCGACGCCGACCGCGAGATCCACGCATGCATTGTAGCGACGCCTCCGCAGCC
CTTCGTGGTTCGTGCTGGCGCAGGTTCCGGCAAGACCACCTCCCTCATCAAGGCGCTGGACTGGGTGATCTCGGAGCACG
GCGCCAGCATGCGGGCGAGGAAGCAGATAGTCGCGTGCATCACGTATACCGACCTTGCCACCAATGAAATCCTGGCGGAC
GTCAACGATGACCCGCTGGTTCATGTCTCGACCATCCACAGCTTTTACTGGTCTATTGCAAAGACGTTCCAGGCCGACAT
CAAGGTTTGGCTGCAGAACGACATCCGCAGGCGGATCTCCGAACTTGAAGAAGAGTTCGAGAATTACAGCTCGCGTGTCC
GGCAGACCACGCGCGACAGGAACAAGGCCGACCAAGAGCGATATGTCCGAAGCCTGGAGGCTGTGGCCGGCGTCAGGACG
TTCAACTACGGCGTGGGCAGTGACTACGCCAAGGGCATACTTGGCCACGAGGACATCCTTCAGCTCGCCGACTTCCTGCT
ACAAAACCGCCCGCTGTTCCGACGGGTCGTGGCGCTGAGCTACCCGTTCGTGTTTATCGATGAGAGTCAGGACACGTTCC
CGGGTGTAGTGAAGTCTTTCAAGGAAGTGGAAGCCCAGATGCAGGGCAAGTTCTGCCTTGGTTTTTTCGGCGACCCGATG
CAGTCGATCTTCATGAGAGGCGCAGGGGACATCCAGCTTGAGGATCATTGGCGGGCCATCACGAAGCCGGAGAACTTTCG
CTGCGCCAAGCAGATCCTTGACGTCGCCAATGCCGTGCGCGCGCAGGGCGATGGCATGGAGCAAGTCCGCGGGCTGCACG
AGAGGGTCGATGGGAACCTCAAGCTGGTGGAGGGGTCGGCCCGGATGTTCGTCTTGCCGAACACGCTGAACCGAACCGAG
GCTTTGGCAAGAGTCCGAGCGTGGAGCTCGGCGACGAACAACGACGAGGGTTGGACAACCCCAGACATCGCAGTCAAGAT
TCTTGTCATCGTGCACCGCATGGCCGCAAACCGGCTTGGCTTCGGCGGCATCTACTCGGCGCTGAACGACAAGACGTCGG
ATGCCATGAAGCAAGGGATGCAGGACGGCACCGGTTGGCCCGTTCGACCCTTCCTAAGTTTTGCGCTACCGATCGTTGCA
GCTGTGAAGGCCGGCAATGAGTTCGCGGCGATGAGCCTGCTCCGGGAATTCAGCCCGCGCCTGGCGCCTGCGGCTCTGAC
CGGCCGACGTGCCGCGGATGTATTGCGAGAGCTGCACGCTGCTGCGTCGAGGCTTGTCGCCATGCTGGACGAGGCAGGGA
CCACCATTGGTGACATAGCTCTCCATCTCTGTGACACGGGTCTTTTTGAGTTCGACGAGCGCTATGCGCGTGTTCTTGGG
TTTGTCAGGGATATTGCTGACACCGCTCAGGAGCCCGAGGCTGCTGATGCAGTTCCGGCCGAAGGATTATCCTTGGACGC
GACAATGGCCAAGTTCTTCAATTGCTCTGCGCAAGAGCTTTGGCCCTATGAACGCTATGTCTCAGAAGGCTCCCCCTATG
CCACGCAGCACGGCGTGAAGGGAGCGCAGTTCGAACGCGTCATGGTGGTGATGGACGAGGAAGAAAGCGACTACCGAACG
TACAACTACGAGCGTGTCTTCGCGAGTGCTGAGGCCCGCGCTGCAGATCGTGCACGAGCACTAGACGGTGATGAAAACAC
TTGGAGCCGAACGCTGCGACTGCTTTACGTCTGCTGCACTCGTGCCCAGCGGGGGCTGGTACTAGCGTTCTTTGTCGCCG
ACCCTGCGACCACCCTGGAAAACGTCGTGGCGAGCGGGATCTTGCCGCGAAGCGCAGTCTTTACGCAGGAAGTGTTAGTT
GGATGGCCATAG
|
| Protein sequence : | |
MSRRIDSPDTDADREIHACIVATPPQPFVVRAGAGSGKTTSLIKALDWVISEHGASMRARKQIVACITYTDLATNEILAD
VNDDPLVHVSTIHSFYWSIAKTFQADIKVWLQNDIRRRISELEEEFENYSSRVRQTTRDRNKADQERYVRSLEAVAGVRT
FNYGVGSDYAKGILGHEDILQLADFLLQNRPLFRRVVALSYPFVFIDESQDTFPGVVKSFKEVEAQMQGKFCLGFFGDPM
QSIFMRGAGDIQLEDHWRAITKPENFRCAKQILDVANAVRAQGDGMEQVRGLHERVDGNLKLVEGSARMFVLPNTLNRTE
ALARVRAWSSATNNDEGWTTPDIAVKILVIVHRMAANRLGFGGIYSALNDKTSDAMKQGMQDGTGWPVRPFLSFALPIVA
AVKAGNEFAAMSLLREFSPRLAPAALTGRRAADVLRELHAAASRLVAMLDEAGTTIGDIALHLCDTGLFEFDERYARVLG
FVRDIADTAQEPEAADAVPAEGLSLDATMAKFFNCSAQELWPYERYVSEGSPYATQHGVKGAQFERVMVVMDEEESDYRT
YNYERVFASAEARAADRARALDGDENTWSRTLRLLYVCCTRAQRGLVLAFFVADPATTLENVVASGILPRSAVFTQEVLV
GWP
|
|
