Name : xerC (RL002)
Accession : AAP84129.1
PAI name : PAPI-1
PAI accession : AY273869
Strain : Pseudomonas aeruginosa B136-33
Virulence or Resistance: Not determined
Product : integrase
Function : -
Note : similar to integrase XerC in Pseudomonas aeruginosa SG17M
Homologs in the searched genomes : 13 hits ( 13 protein-level )
Publication :
-He,J. and Rahme,L.G., "Direct Submission", Submitted (09-APR-2003) Department of Surgery and Department of Molecular Biology, Massachusetts General Hospital and Boston Shriners Institute, Harvard Medical School, 55 Fruit Street, Boston, MA 02114, USA.
-He,J., Baldini,R.L., Deziel,E., Saucier,M., Zhang,Q., Liberati,N.T., Lee,D., Urbach,J., Goodman,H.M. and Rahme,L.G., "The broad host range pathogen Pseudomonas aeruginosa strain PA14 carries two pathogenicity islands harboring plant and animal virulence genes", Proc. Natl. Acad. Sci. U.S.A. 101 (8), 2530-2535 (2004) PUBMED 14983043.
| DNA sequence : | |
ATGACGCCGCAGCAGCTCACCGAGGAGTACATCTTCGCGCACGATCTCCGGGAAGCCAGCGCGAAGATCTACCGCGCCGC
GACCAAGGCGCTGCTCAAGCACTTCGGTCCTACGGCAACCGTACAGGACGTGGACCACCGGGCTGTCCTGGGATGGCGAC
GCAAGGTACTGGAACAAGGCCTGTCCAAGCGGAGCTGGAACACGTACTCGAATCATCTGCGGACGATCTGGGGCTATGCC
ATCGAGCATGAGTTGGTGACGCACTCCCAAGTCAACCCGTTCAGAAAGACCACCGTCATTCCCCCCAGGCGAGCAAGCAA
AACCGTCGCCGCCGAAGCCATCCTGCTCGCCCGCAATTGGCTCAACATGCAGGACGGCGCAGAGCGCTGCACCGGCGAAC
GCGCACGGATCACGCCCGCCTGGTTCTGGCTTTGCACGTTTGAGGTCTTCTACTTCACCGGCATCCGGTTGAATGCGCTG
TTGTGCATCCGCAAGCGCGACATCGACTGGGAAAATCAACTGATCCTCATCCGCGGCGAGACAGAGAAGACTCACAAAGA
GTTCGTAGTGCCAATAACGGAGGGGCTTGTGCCTCACCTATCGAGGCTCCTGCAAGAGGCCGATAGAGCCGGATTCGCCG
ATGACGACCAGTTGTTCAACGTCAACCGGTTCTCACCGCACTACAAGAGCAAGGTGATGAACTCCGACCAGGTCGAAGCC
ATGTACCGGAAGTTGACCGAGAAGGTTGGGGTGCGGATGACCCCGCACCGTTTCCGGCACACCCTGGCCACCGACTTGAT
GAAGGCACCCGAGCGGAACATTCACCTCACGAAGTGCCTGCTCAACCACTCGAATATCCAGACCACGATGAGCTACATCG
AGGCCGACTACGATCACATGCGTGCCGTGCTGCATGCTAGAAGCCTGGCCCAAGGCGCGCTGGAGAATGTCAGGAAGGTG
GATTACAGCGGCTCCCCGCAAGCCTCTGCCAAACCGAAGCCATGCGGGCAACCTCTCGCTCGAGTGAGTGAAGCGCCGCC
ACCGGAGGCCAGGACAGAGCCTGCAGAACCAAGGGAGCACACGCCAGGGACAGGCATTCAGGGAGGTCCAACCGCGTGGG
AAGCAGATGCGCTACCACAGCCACCTGACACCTTCGAACCAAGCGTGCTGTTCACTCTGATGGCTCAAAACTTATCGAAC
CGTGCCGCCTCGGCATCCGCGGCTCCCGCTGCAACAAGCGGATCAGGCGGATGGGGATCTGCCGCCCGAAGCAATCTCGC
CTAG
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| Protein sequence : | |
MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQGLSKRSWNTYSNHLRTIWGYA
IEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILLARNWLNMQDGAERCTGERARITPAWFWLCTFEVFYFTGIRLNAL
LCIRKRDIDWENQLILIRGETEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA
MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHMRAVLHARSLAQGALENVRKV
DYSGSPQASAKPKPCGQPLARVSEAPPPEARTEPAEPREHTPGTGIQGGPTAWEADALPQPPDTFEPSVLFTLMAQNLSN
RAASASAAPAATSGSGGWGSAARSNLA
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