Name : unnamed
Accession : AAP70299.1
PAI name : HPI
PAI accession : AY233333
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : VC0178-like protein
Function : -
Note : ORF25; similar to Vibrio cholerae patatin-related protein VC0178 deposited in GenBank Accession Number AAF93354
Homologs in the searched genomes : 7 hits ( 7 protein-level )
Publication :
-Schubert,S., Dufke,S., Sorsa,J. and Heesemann,J., "A novel integrative and conjugative element (ICE) of Escherichia coli: the putative progenitor of the Yersinia high-pathogenicity island", Mol. Microbiol. 51 (3), 837-848 (2004) PUBMED 14731283.
-Schubert,S., Dufke,S., Sorsa,J. and Heesemann,J., "Direct Submission", Submitted (11-FEB-2003) Department of Bacteriology, Max von Pettenkofer-Institut, Pettenkoferstr. 9a, Munchen 80336, Germany.
| DNA sequence : | |
ATGGGGTTTTCAATGTCTGAATTGCATGTAGTCAATGACCATGGAGTACGGCTACTCTGCCTAAATGGTGGTGGGGCCAG
AGGGATGTTTACAATCAGTGTGCTTGCTGAGATTGAGAGGATACTTGCCTCTAGGCACCCTGACCAAGAAATCAGAATTG
GCGATTACTTTGACCTCATCGCAGGGACATCGATAGGTGGGATCTTGGCTCTCGGCCTTGCTAAAGGCAAGAGTGCTCGC
GAGTTGGAATGTGTTTTCTTAGATAAAGCGAATGATATTTTTCCACCAAGATGGTGGCTATTCAATCTCCTTAAATCACT
TGTTTCTCCCATTTATAGTAGTAAACCACTTCGACAAACAATTGAAACGATGATCGGTGGTGAGACTACCTTTAATGACC
TGGCCCGGAGAGTAATGGTCCCGGCAGTCAATCTTTCAACAGGAAAACCTCAGTTCTTCAAGACACCACATAACCCAGAT
TTTACCCGCGACGGTGCACTTAAATTGATTGATGCCGCACTCGCAACCTCCGCTGCACCGACGTTCTTTGCACCACACCA
TTGTGAAGACCTTGGTTCTTATTTTGCTGATGGAGGTCTGGTCGCCAACAACCCCAGTTATATCGGATTTTTGGAAGTTT
TCAGGGACATGAAGTCTGATTTTCCTGATGTTGCTCATAAAGACATACACATACTTAATATCGGTACTACCGGGGAAGAG
TATTCACTTAGCCCAAGGCTGCTGAGCAAAAAATGGTGGAATGGCTACTGCCGACTTTGGGGCGTAGGTAAAAAACTGGT
CCTTACAACCATGGCGGCTAACCAACATCTCCATAAAAATATGCTCCTGCGCGAGCTTACGCTCCATGGTGCCTCCGATA
ACTACACCAGTCTGGATGAAGTGATCCCTAATGAAGCAGCCAGCGACATCACTCTGGATAATGCCACGAAGAGTTCCATT
GAAAACCTGCGCGCAAGGGGAAGACAACTCGCTACTGTGCAGTTCGCTCAGAACCAGAAGCTTAAGAGCTTTTTCACTAC
ACCTGCAAAACCCTTTAAGCGCGCAATCGCGCAGGAGAAACTCTGA
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| Protein sequence : | |
MGFSMSELHVVNDHGVRLLCLNGGGARGMFTISVLAEIERILASRHPDQEIRIGDYFDLIAGTSIGGILALGLAKGKSAR
ELECVFLDKANDIFPPRWWLFNLLKSLVSPIYSSKPLRQTIETMIGGETTFNDLARRVMVPAVNLSTGKPQFFKTPHNPD
FTRDGALKLIDAALATSAAPTFFAPHHCEDLGSYFADGGLVANNPSYIGFLEVFRDMKSDFPDVAHKDIHILNIGTTGEE
YSLSPRLLSKKWWNGYCRLWGVGKKLVLTTMAANQHLHKNMLLRELTLHGASDNYTSLDEVIPNEAASDITLDNATKSSI
ENLRARGRQLATVQFAQNQKLKSFFTTPAKPFKRAIAQEKL
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