Name : unnamed
Accession : AAP70294.1
PAI name : HPI
PAI accession : AY233333
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : TnpA-like protein
Function : -
Note : ORF20; similar to insertion element IS630 hypothetical 39 kDa protein deposited in GenBank Accession Number CAA29389
Homologs in the searched genomes : 172 hits ( 161 protein-level, 11 DNA-level )
Publication :
-Schubert,S., Dufke,S., Sorsa,J. and Heesemann,J., "A novel integrative and conjugative element (ICE) of Escherichia coli: the putative progenitor of the Yersinia high-pathogenicity island", Mol. Microbiol. 51 (3), 837-848 (2004) PUBMED 14731283.
-Schubert,S., Dufke,S., Sorsa,J. and Heesemann,J., "Direct Submission", Submitted (11-FEB-2003) Department of Bacteriology, Max von Pettenkofer-Institut, Pettenkoferstr. 9a, Munchen 80336, Germany.
| DNA sequence : | |
ATGCCGATCATAGCACCAATACCCCGTGGCGAACGACGCCTGATGCAGAAAGCTATTCATAAAACGCGCGATAAAAATCA
TGCCCGCAGACTCACGGCCATGCTGATGCTTCATCGGGGTGAACGGGTCAGCGATGTTGCCAGAACTCTCTGTTGTGCCC
GTTCATCCGTTGGTCGCTGGATTAACTGGTTTACGCACTCAGGTATTGAAGGCCTGAAATCCTTACCCGCAGGGCGCTCC
CGACGCTGGCCTTTTGAACATATCTGCACCCTGTTACGTGAGCTGATAAAGCATTCTCCCGGCGATTTTGGTTATCAACG
TTCACGCTGGAGCACCGAATTACTGGCAATAAAAATCAACGAGATAACCGGTTGCCAGTTACATGCAGCAACCGTTCGCC
GCTGGTTGCCATCTGCGGGGCTTGTATGGCGCAGGGCCGCGCCAACTCTGCGTATCCGTGACCCACATAAAGATGAAAAG
ATGGCGGTAATCCACAAAGCGCTGGATGAATGCAGCGCAGAGCATCCGGTATTTTATGAAGATGAAGTGGATATCCACCT
TAATCCTAAAATCGGTGCGGACTGGCAGTTGCGCGGACAGCAGAAACGGGTAGTGACTCCGGGGCAGAACGAAAAATACT
ATCTGGCCGGCGCACTGCACAGTGGCACGGGTAAAGTTAGCTACGTGGGCGGCAACAGCAAAAGTTCAGCGCTGTTTATC
GCTCTGCTGAAGCACCTGAAAGCCACTTACCGGCGGGCGAAAACAATCACGCTGATCGTTGATAACTACATTATCCATAA
AAGCCGCGAAACACAGCGCTGGTTGAAAGCAAATCCCAAGTTCAGGGTAATTTACCAGCCGGTTTACTCGCCGTGGGTGA
ATCATGTGGAACGGCTATGGCAGGCACTTCATGACACGATAACCCGTAATCATCAGTGCCGCTCAATGTGGCAGTTACTG
AAAAAGGTCCGCCATTTTATGGAAACCGCCAGCCCATTCCCCGGAGGAAAACATGGTCAGGCAAAAGTGTAG
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| Protein sequence : | |
MPIIAPIPRGERRLMQKAIHKTRDKNHARRLTAMLMLHRGERVSDVARTLCCARSSVGRWINWFTHSGIEGLKSLPAGRS
RRWPFEHICTLLRELIKHSPGDFGYQRSRWSTELLAIKINEITGCQLHAATVRRWLPSAGLVWRRAAPTLRIRDPHKDEK
MAVIHKALDECSAEHPVFYEDEVDIHLNPKIGADWQLRGQQKRVVTPGQNEKYYLAGALHSGTGKVSYVGGNSKSSALFI
ALLKHLKATYRRAKTITLIVDNYIIHKSRETQRWLKANPKFRVIYQPVYSPWVNHVERLWQALHDTITRNHQCRSMWQLL
KKVRHFMETASPFPGGKHGQAKV
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