Name : unnamed
Accession : AAP70293.1
PAI name : HPI
PAI accession : AY233333
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : helicase-like protein
Function : -
Note : ORF17; similar to Dichelobacter nodosus putative DEAH ATP-dependent helicase deposited in GenBank Accession Number AAC33388
Homologs in the searched genomes : 12 hits ( 12 protein-level )
Publication :
-Schubert,S., Dufke,S., Sorsa,J. and Heesemann,J., "A novel integrative and conjugative element (ICE) of Escherichia coli: the putative progenitor of the Yersinia high-pathogenicity island", Mol. Microbiol. 51 (3), 837-848 (2004) PUBMED 14731283.
-Schubert,S., Dufke,S., Sorsa,J. and Heesemann,J., "Direct Submission", Submitted (11-FEB-2003) Department of Bacteriology, Max von Pettenkofer-Institut, Pettenkoferstr. 9a, Munchen 80336, Germany.
| DNA sequence : | |
ATGTCGGCCATTTCTCTCTACCTTCTCGCTGTAGAAAGGGGAGAATCACGTTTGCTTTCCAGGGCTATTGAAAAATTAAG
AATTAGTCTAAGTATATGTGCTCAGTTTAATATGCTACCCCAGTGGTGGCTAAACTTTATTACCATTCATCTGTTATCTG
ACCTTTGGTCAGATACATTCCATGAAAGATTGCCACTGGTTCCAGTTGGTGGTGACGCTGCTGAATGGCCCGCGCTTCGG
GAACTGTTTATTGCACTGCTTCAAAGACGACCTCGAGCCGAAATTGATCTCTGGCCATCGCAGAGAGAGGCCGCCGGACG
CTCTGTTAATGACAATGACGATTTGGTTGTTTCGTTGCCAACCAGCGCTGGAAAAACTCGTATTGCTGAATTGTGTATTC
TTCGCTGTCTGGCGGGTGGCAAGCGTGTTGTTTTCATCACCCCGCTTCGTGCGCTTTCTGCACAAACAGAAGCCACTCTC
TCCAGAACATTTGGGCCGCTTGGGAAAACAATATCAATGCTGTATGGCAGCATTGGCGTAAGTGGTATGGATGAGGATGC
AATTCGCCAGCGTGACATCGTCGTCGCCACGCCTGAAAAACTTGACTTTGCTCTCCGGAATGACCCGTCAATTATTAATG
ATGTAGGACTTTTTATTTTTGATGAGGGGCACATGATTGGGGCCGATGAACGAGAGGTTCGGTATGAAGTTCAAATTCAA
CGGCTGTTGCGCAGACAGGATGCCGATACGCGCAGAATTGTCTGCCTCTCGGCAATTCTACCTGATGGTGAGCAACTCGA
TGATTTTGCCGGTTGGCTCCGTCGTGACAAGCCCGGAGGACCAATCAAAAATAATTGGCGACCGACCCGCTTGCAGTTTG
GCGAGGTCATATGGTCCGCTCCAGCAGGTCGGCTTAATCTCAGCGTCGGTTATGAGGCGGCTTGGGTATCGCGTTTTATC
GTCAGCAGACAACCGCCAAAGGTTAAATTACCTAATAAAAAGCAGCGAACAAAAATGTTTCCCTCTGATAACAAGGAGCT
CTGCTTAGCGACAGCCTGGCGTCTAATTGAAGATGGACAGACCGTACTTATCTACTGCCCACTTCGCCGGAGCGTCGAAC
CGTTTGCCGAGACAATTGTCGATCTGCATCAGCGCGGACTACTGCCATCTTTATTTGATGCTGCCCCGGACATTCTGGAT
ACGGCTATCTCGCTGGGAGAAGAATGGTTGGGGGCACACAGCCCGATACTTGCCTGCCTACGGTTGGGCGTGGCTCTTCA
TCATGGCGCATTGCCTACGGCTTACCGCAAAGAAATCGAACGTTTGCTGCGAGATGGGGTACTTAAAGTGACGATCTCAT
CACCGACGCTAGCACAAGGTCTTAATCTTTCGGCAACAGCTATCGTCATGCATTCTCTTCATCGGAATCGCGAGCTTATC
AAAGTGTCCGAGTTCAGAAACGTCATAGGCAGAGCAGGGCGCGCATATGTAGATGTTGAAGGGCTGGTGATTTATCCAAT
ATTCGATAAAGTAAATAAACGCCAGACTAACTGGCATACCCTCACATCTGACACGGGGGCCCGTGAGATGGAGAGCGGAC
TAATACAGCTTGTCTGTGTGTTATTGATTCGCATGCATACACGGCTTGGTGGGGATTTAAAAGCACTCACTGAATATGTG
ACCAACAACGCCGTAGCGTGGGAATTTCCAGAAATTATGACCGAATCTCCGCAAGAAAGAGATATTGCGCAGGCCATCTG
GGAAAAACAACTTTCAACGCTTGATACTGCTATTCTGAGCCTTCTTGGTGAGAATGATATCCCGGATGACCAGATTGAAA
CTGCTCTTGATGACATTCTTCAGTCTTCACTTTGGCAACGCAGTTTGCAGCGTTATAGGGATGAGAATGAACGGATTTTG
CTGAAATCGGGACTCCTGTCCCGCAGCCGCTACATCTGGCAGCGCTCAACGGCAGCAGGGCGCCGGGGGTATTTCCTGTC
GGGGGTAGGACTTACAACCGGGCTACGACTTGATGCTATTGCCGCTAAGGCCAACCAACTATTGATTGATGCGAATGCGG
CTATAATGGGCGGTGATGCCGAAGAGGCAATTGCTGCTATCACGGCGCTCGCTGAAGAGGTCTTTACCTTCTATCCGTTT
ATACCCGATCCATTGCCTGGCGACTGGAGAGGTATTTTACGTTCCTGGCTATTGGGTGAACCCATGACTAACGTCGCGAA
TACGCAGGCGTCTGAAACGCTTCAATTCGTCGAGAATGGGCTGGTGTATCGACTTCCGTGGGCAATGGAGGCTATTAGGG
TACGTGCAACAGCTAATGGAGACCTCATAGGTGATACAGATACCACGCTAGACGATTATGAGTTAGGTTTTGCGGTTGCT
GCTGTTGAAACAGGTACCTTGAGCCGTTCGTCTTCACTGCTTATTCAGGCGGGTTTTAGCTCTAGGCTTGCAGCCATAAA
AGTGGTTACAGACACTACTGCCGATTTTCAATCCGGCCAGGAGCTTAGAAGGTGGCTGAACTCTGAAGAAGTGATAAGCC
ACACGGATAATCATGACTGGCCTACACCTGAAACCAGAGTGATGTGGCTGGAATTCTTGGGTAGTCTCAGCCCCAAAGGC
AGCCAGGTTTGGAGTCGTCATCGTTATAACGGAATGGTGGACTGGAGAGATACTCCGGCAGTGATCGGCACACCATTGCA
GCTTTACACTGTTGATGGTATTCATCACGTACTGGCTGATGATGGCACTCCTCTGGGAAGTATAAATGGCAGAATTAACA
CAAACAGAAGAGGTCTTCTTAGAGTTGAGGTGGATGATGAGAATGGTCGTGCCATGTTCGATTATTTAGGACCGGACGAC
TTTATTTCTACCTGA
|
| Protein sequence : | |
MSAISLYLLAVERGESRLLSRAIEKLRISLSICAQFNMLPQWWLNFITIHLLSDLWSDTFHERLPLVPVGGDAAEWPALR
ELFIALLQRRPRAEIDLWPSQREAAGRSVNDNDDLVVSLPTSAGKTRIAELCILRCLAGGKRVVFITPLRALSAQTEATL
SRTFGPLGKTISMLYGSIGVSGMDEDAIRQRDIVVATPEKLDFALRNDPSIINDVGLFIFDEGHMIGADEREVRYEVQIQ
RLLRRQDADTRRIVCLSAILPDGEQLDDFAGWLRRDKPGGPIKNNWRPTRLQFGEVIWSAPAGRLNLSVGYEAAWVSRFI
VSRQPPKVKLPNKKQRTKMFPSDNKELCLATAWRLIEDGQTVLIYCPLRRSVEPFAETIVDLHQRGLLPSLFDAAPDILD
TAISLGEEWLGAHSPILACLRLGVALHHGALPTAYRKEIERLLRDGVLKVTISSPTLAQGLNLSATAIVMHSLHRNRELI
KVSEFRNVIGRAGRAYVDVEGLVIYPIFDKVNKRQTNWHTLTSDTGAREMESGLIQLVCVLLIRMHTRLGGDLKALTEYV
TNNAVAWEFPEIMTESPQERDIAQAIWEKQLSTLDTAILSLLGENDIPDDQIETALDDILQSSLWQRSLQRYRDENERIL
LKSGLLSRSRYIWQRSTAAGRRGYFLSGVGLTTGLRLDAIAAKANQLLIDANAAIMGGDAEEAIAAITALAEEVFTFYPF
IPDPLPGDWRGILRSWLLGEPMTNVANTQASETLQFVENGLVYRLPWAMEAIRVRATANGDLIGDTDTTLDDYELGFAVA
AVETGTLSRSSSLLIQAGFSSRLAAIKVVTDTTADFQSGQELRRWLNSEEVISHTDNHDWPTPETRVMWLEFLGSLSPKG
SQVWSRHRYNGMVDWRDTPAVIGTPLQLYTVDGIHHVLADDGTPLGSINGRINTNRRGLLRVEVDDENGRAMFDYLGPDD
FIST
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