Name : pdpB
Accession : AAP58967.1
PAI name : FPI
PAI accession : AY293579
Strain : Francisella novicida 3523
Virulence or Resistance: Not determined
Product : PdpB
Function : -
Note : -
Homologs in the searched genomes : 30 hits ( 30 protein-level )
Publication :
-Gray,C.G., Cowley,S.C., Cheung,K.K. and Nano,F.E., "The identification of five genetic loci of Francisella novicida associated with intracellular growth", FEMS Microbiol. Lett. 215 (1), 53-56 (2002) PUBMED 12393200.
-Gray,C.J., Cowley,S.C. and Nano,F.E., "Direct Submission", Submitted (24-MAY-2001) Biochemistry and Microbiology, University of Victoria, P.O. Box 3055, Victoria, BC V8W 3P6, Canada.
-Nano,F.E., Zhang,N., Cheung,K.K.M., Roberts,M.J., Ludu,J.S., Letendre,G.W., Meierovics,A.I., Cowley,S.C. and Elkins,K.L., "Direct Submission", Submitted (08-MAY-2003) Biochemistry and Microbiology, University of Victoria, Petch Building 207, Ring Road, Victoria, B.C. V8P 5C2, Canada.
-Nano,F.E., Zhang,N., Cowley,S.C., Klose,K.E., Cheung,K.K., Roberts,M.J., Ludu,J.S., Letendre,G.W., Meierovics,A.I., Stephens,G. and Elkins,K.L., "A Francisella tularensis pathogenicity island required for intramacrophage growth", J. Bacteriol. 186 (19), 6430-6436 (2004) PUBMED 15375123.
| DNA sequence : | |
ATGAATTTTATTAAAAATCATCAAATATTAATAATTTCACTAACTATAGCAATAATTGTTTTATCAGTACTTGGTATTTT
TATAATTAAAAAATGGCTTAAAACATCAAGAAATCCTAACAAAAAATCTGCCTCAAAGACCATAAAAAATGCAAAATCAT
TGATCAAAAAGAATAAAGTAAAAAACAACTTAAGTGAATTGTATATTTTCTATGGGGACTATCTGGCAGCTAAAGATTAT
ATAACAAAGATAAAGCCTCAAGCTCAAATCATTGATAATAATGAACTCCCTTTAATAGCTATTGATAAAAACAATACATC
TCTCGTATTTGCAAATAATGAATTTTCGTACCTATATAAGTTAAAAAAGAAACTAAATCTACAATTTTATAAGCTTAACT
TTTGCTTCGATATATCCGATGATTACTACCATGAAAATATCAAAATTAGTGAAATCTATAAAGAACTATTAAAATTAAGA
TTAAAAAACTTCATAATATCTTTTTACACCTTATCTGAGCATACTAGAAGCTATAATAATGCAATTGATAAAAAATCAAT
ATTTAAATTAACTTCTGATGCGGATACAAATCATAAAGCTGAAGAGGAAATATTATCAAAAATTCTTAGCTCTAAAGATG
ATGTTAATAATAAATACAATAATGTTAGGATATTAAATCAAATAAGAAGGTTGCTAAAAAACATCTACCCTCAATTAAAA
TCTATAAATAAAGAAATATTCTTTAATTTTGGGCTAAACATACCAGATAATATTATAGCAAAGAAAGATACAATATTTTT
TAGCAGCTCTCCAAAAGGTATTATTATAAACTTAATATCTTTGTTATTTAGTTTTATATTTATCATTAATATTTTTCAAG
AAATTAACATTAAAGAAAAACTCTCTATACAAGAGCTTAATCAACTACATGAAAGCGACTCTAATAAAATAATAAAAGAA
GCTAGAAAAAAAATTGATGATGCTATACTTCTAGACATCCTATATCCAAAATCGATAAAATATCATTTCATATACGAACA
ATATGCTGATACTCTCCTAAAGAATGTAATCCTACCAAAATATAATGATACATATGACTTATCAATGATTACATCATTTT
TAATATTTTTTGAGTATTTGGATAACAAAATTACTAACCAACATACGAATAGAATACTTAAAATAATAAGCAGTATCACC
AACCTATCTGAAAAGCAGCTAGATATCGTGATCAAGTATACGACCCCAAGTATAAGAACTGAAATGATTAAGTCAGCCAT
CAACAGAGCAAATAAACTTTATACAAATCGTTTAATAGTTGTAGGTGAAGACTCCGAAAGTTACTTAAGTACTAAAGGAT
TTAATGCTGAATACTTAGGGATTTCAAATACTAAAAGAGCGAAGGTCATAAATAATATTTATATACAATACCTATATAAA
TGTGCTACAGATAATGCAATTTTAGATTTAAACGATAACTACATAATACCAACAGAAGTAAATAATATCTTCAAGATGTA
TCAAGAGCAATTTGACACATCATCTAAAAAGCTATGTAATTCATCATATATTAACTCTATTACAAAGAGTGTTTCTTTGA
TACTTAATCAAGAGGAAAATAAAAGAAAATTTAAAAGCTTCAGTGATATGCTAGACCATATCTATTATTTAGTAAAATCA
TTAGAAAAAAATGCTAAAGATGTCGCAGATGATGGTAAAGAACAAACTAGCTCGATAACAGTATCGCTTATAAATTACGT
TATAAATAGTGTTGTCAACCCTACTTATAATAAAAATGAGCTCCCACTAATAAGTCCAGTAAGTAAAAACCTATATATGG
AGTTTGCTCCTAATTTCTATAGTAAAAGAATACTTATCTCCCCAATATACTCAAAAGAATATATTAAAGATAATATAGAT
CCTATAAATAAAAAGTTTAATAGACTCGTCAATAATCTAAAGAATAACTTCAATATAGAACCCGACTTTATGATTGCTAT
CTATAAAAGTTCTATAAACAACTACATTGAGAAATATATAGGATCCTATAATAAGATGATTGATAGCCTTAATAATGACT
CTGAATTTAACAAAAATATATCTAACAAGGGTGCTCTTAAATTATATTTGCTAGCAATGTCATCAAAGGATTCTTCCTTT
AATAGCCTAATAGAGTTTTATAGCACTAATACAGACCTAATAACTAATGAATCCGAAACCAATTCATCTAAAAAGATAAA
TAAGCTTCAACATTTTTATGGAGAAATAACTAAATTAAACAAACAAAACAATACTAATGATCCAAATGATAAGTCATTGT
GGGAGCCTATAGATAACTACTTTAAAGAAAACGATAAATATCTTGAGTCTAAGAGTTATGCCGACTATAAAAACATATTT
AAACAGTTAAATAATCTAATAATAGAACAAGGCTATTCAAGTACATATAAAAATATCAAACAAGGATATGAACCACTACA
AAAAGTTTACTCTGAACTTTCTAAGATAAATAATCATCAAGGTAATAATAACTTATATAAACTGCTGAAGAAACATCTAG
ATATTGCCATTAATGCTATAAAAACTATCGCGATACAAGATGCTATAACTAAACTTAATAATACTGTCAATATTGAGTAC
GAATATATAAATAATCAATTCCCTTTTAATAAGGATAGTAACTCGGCTGCAACAAATGAAGCTATAACCAAAGACTTTGA
TAACAATGGTTATATATACTCTGGATTTATAGAGCAGCTATCTCCACTACTTTCTTATAATAAAACAGATGATAGATGGG
AAAGTAAAGATTTTTCAAAACCTGAGGAAATAGACTATCTAAACAAATTCAATAAGGTATATCTTTTAAATAAGCTACTA
TGGGATGATAAAAGAAATCCAAAAGCTATAAAATTTGATATAACTCCTATACCAAACAAAGATAATGATTATACATTTTT
TAGCATAATCCTCGATAAGCAAAACTATGTAAACTCATTAAACATAAAATATTCAGATAGTATTGAAGTTTTGTACAACT
GGAATTCACTTGAGTCAACAACTATTACCATAAAATTTGAGGATGGTAGTAATGAGCAAATAAGCTATCAAGGAAAATGG
TCTATATTAAAAGCAATTAAAGACGCAAATTGTGATCAAAACAATATTTGTACCTGGGTAATCAAGCACAAAGGTAAAAC
ATATCCTGTAAGCTTCAAAATAAAATCAAAATTCTTACAAGTATTAGGATGGCAAAAACAAGGAGAAGTCAATGTACAAT
AA
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| Protein sequence : | |
MNFIKNHQILIISLTIAIIVLSVLGIFIIKKWLKTSRNPNKKSASKTIKNAKSLIKKNKVKNNLSELYIFYGDYLAAKDY
ITKIKPQAQIIDNNELPLIAIDKNNTSLVFANNEFSYLYKLKKKLNLQFYKLNFCFDISDDYYHENIKISEIYKELLKLR
LKNFIISFYTLSEHTRSYNNAIDKKSIFKLTSDADTNHKAEEEILSKILSSKDDVNNKYNNVRILNQIRRLLKNIYPQLK
SINKEIFFNFGLNIPDNIIAKKDTIFFSSSPKGIIINLISLLFSFIFIINIFQEINIKEKLSIQELNQLHESDSNKIIKE
ARKKIDDAILLDILYPKSIKYHFIYEQYADTLLKNVILPKYNDTYDLSMITSFLIFFEYLDNKITNQHTNRILKIISSIT
NLSEKQLDIVIKYTTPSIRTEMIKSAINRANKLYTNRLIVVGEDSESYLSTKGFNAEYLGISNTKRAKVINNIYIQYLYK
CATDNAILDLNDNYIIPTEVNNIFKMYQEQFDTSSKKLCNSSYINSITKSVSLILNQEENKRKFKSFSDMLDHIYYLVKS
LEKNAKDVADDGKEQTSSITVSLINYVINSVVNPTYNKNELPLISPVSKNLYMEFAPNFYSKRILISPIYSKEYIKDNID
PINKKFNRLVNNLKNNFNIEPDFMIAIYKSSINNYIEKYIGSYNKMIDSLNNDSEFNKNISNKGALKLYLLAMSSKDSSF
NSLIEFYSTNTDLITNESETNSSKKINKLQHFYGEITKLNKQNNTNDPNDKSLWEPIDNYFKENDKYLESKSYADYKNIF
KQLNNLIIEQGYSSTYKNIKQGYEPLQKVYSELSKINNHQGNNNLYKLLKKHLDIAINAIKTIAIQDAITKLNNTVNIEY
EYINNQFPFNKDSNSAATNEAITKDFDNNGYIYSGFIEQLSPLLSYNKTDDRWESKDFSKPEEIDYLNKFNKVYLLNKLL
WDDKRNPKAIKFDITPIPNKDNDYTFFSIILDKQNYVNSLNIKYSDSIEVLYNWNSLESTTITIKFEDGSNEQISYQGKW
SILKAIKDANCDQNNICTWVIKHKGKTYPVSFKIKSKFLQVLGWQKQGEVNVQ
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