Name : hpaF
Accession : AAP34359.1
PAI name : Hrp PAI
PAI accession : AF499777
Strain : Xanthomonas axonopodis 306
Virulence or Resistance: Virulence
Product : HpaF
Function : -
Note : hrp-associated protein; leucine-rich repeat protein; similar to Xanthomonas oryzae pv. oryzae HpaF protein
Homologs in the searched genomes : 8 hits ( 8 protein-level )
Publication :
-Kim,J.-G., Park,B.K., Yoo,C.-H. and Hwang,I., "Direct Submission", Submitted (09-APR-2002) School of Agricultural Biotechnology, Seoul National University, 103 Seodundong, Kwonsungu, Suwon, Kyunggido 441-744, Korea.
-Kim,J.G., Park,B.K., Yoo,C.H., Jeon,E., Oh,J. and Hwang,I., "Characterization of the Xanthomonas axonopodis pv. glycines Hrp pathogenicity island", J. Bacteriol. 185 (10), 3155-3166 (2003) PUBMED 12730176.
| DNA sequence : | |
ATGTTCAATATAAATCGCTTACTGCGCTCTCGTCCGCGAACGGACACTGCCGATCAAGCACCGGCTGAAGACAGGCCTTC
ACATCAGCCTTCGGCCGCAGAGGGCTTGCTGAGCCCTCTGCTCGCGCGGCCGCGGCGGCGCGAAAGCGCGTCGGCGCCTA
GAAACGCGGGGCAAAGGAGCCCTTTCCGATCGCCTCTGCGTGCGTCGGGCCAGCCGGCTGCACTCGCGGGAGCCTCTTCT
GCGCCACCGCGCAGCATCGAGCACGACATCGACGATTGGCTTGCGCAAAGCCTACCGATGGCAGAGAGGGTTCGAACGGG
CTACAACCTGCACGACGGGCAGAGAGATACGTCGCGGGAAGTACTGCAAAGCGTCGCAGATGCAATCCGCCGTGCAGCGA
CTCGCCATAGCACCGAGCTTGTCCTCGACTACGGCCTGCCTGCCACGACGCTGCCTGACGTGATCGGCCGGCTCGACGCG
CTACAGAAATTGACGCTGCTCCATACCGGGCTCCAATCGCTGCCAGACAGCCTGGGGCAGCTGCACCAGCTCCGCCATTT
GCAGATCGCTGGCGCGCTGGGCCTGAAAACGCTGCCACCCTCGTTGACGCGCCTGTCCAATCTCAGAACCCTTCAATTGA
CGATGATCCCGTTGGACGAATTGCCCGTAGGCATTGGCCGCATGCAGGGTCTGCGCAGCCTCACGCTAGGTGGCGGGCAC
TATGCGCGTCTGCCGGCCAGCATCGTTGAACTGAGCGGATTGACCGAGTTGCGCATGCCGTACTCTTCGCATTTTCGCGA
GTTACCTGAGAACATCGGCCTCATGCAGGGGCTCAGGTCGCTGGAGGTGGCATCGAATTCCGAGCTAGAGCAGCTTCCTG
GCAGCCTCACCCAGCTGCATCGGCTGGAAAAACTCACCCTGTCGTCCAACCGCCGGCTGGCGCATTTGCCTGAAGACATC
GGCCAACTGCGCGGCTTGACGGAACTCTCGCTCAAAAATTGCGCTGCGCTGCGGCAGCTGCCCGACAGCGTGGGGGATCT
GGCCCAGCTGCAACTGCTGGACCTGCGCGGCACCGGCCTGCAGACCCTTCCACAGTCGCTGGCACGACTGCCCGCTCAAT
GCGATATCAAGGTACCGGATCATCTGGCAGGCCAATTGCTGCAAATCCGCGACCCGGAGCGCGCTGCGCGCGAGCCACAG
CGCGCGGCACAGCGACTGGCCGAGAGAAGGCGGCGCGCGCCTGTGCCGGCGGCGCAGCAGGCCGGGGCATCGTGGAACCG
CATGCCCGAGTTCGCGCGCGTGCTGCGCACTGTCGATGCCGACCTGGGCGAGCGTTTTGACAAGTGGACGCAAGGCTTGG
CGCAAACTGCCAGGATCTCCGGCGCATCCATCACGCCGGCCGACATGCCCCTGCTGGACCAGGTGGTGACCGAGGCCATT
CGCTCACCCGAATTCCGCAGCAGCTTCGGCCAATTTTTGAGCGACCACACCCTCAAGACGCTCAACATGGATGGCATGAC
GCAGGTGGGCGGTTTCGGGCCCGCCGTGCGAGGAGACGTCAAAACCGCGTTTGCCGAGATGCTCAAGCACAAGCTCATGC
ACACGCAGGACCACCAGACTGCACTGGGCCTGCTGCAGGACGCCCTGCAAAATCCAGACTTGGGGCTGTCCAGGGAGATG
CTGCTGCGCAGCAGGAATGAACTCACCGGGCGTGTGGAGATGTGGCCGCCATTGAAGGCCTATATTTCCATGCACGATGT
GGAGGGACAAGCGGCGCAGGATGCGGCGATCACGTGGACGATGGCGCAGTTCGAAGAAGCGCAGCAGGGTGGCATCGGGG
ACGCAGAGGCCAAGCAGGAGTCCGAACGTGCGCAGGCCAACGCGAACCGCTTCATCGAGCAGCGGGCCCGTGTACTGCTC
AGGGAATGGGACATCCGTTAG
|
| Protein sequence : | |
MFNINRLLRSRPRTDTADQAPAEDRPSHQPSAAEGLLSPLLARPRRRESASAPRNAGQRSPFRSPLRASGQPAALAGASS
APPRSIEHDIDDWLAQSLPMAERVRTGYNLHDGQRDTSREVLQSVADAIRRAATRHSTELVLDYGLPATTLPDVIGRLDA
LQKLTLLHTGLQSLPDSLGQLHQLRHLQIAGALGLKTLPPSLTRLSNLRTLQLTMIPLDELPVGIGRMQGLRSLTLGGGH
YARLPASIVELSGLTELRMPYSSHFRELPENIGLMQGLRSLEVASNSELEQLPGSLTQLHRLEKLTLSSNRRLAHLPEDI
GQLRGLTELSLKNCAALRQLPDSVGDLAQLQLLDLRGTGLQTLPQSLARLPAQCDIKVPDHLAGQLLQIRDPERAAREPQ
RAAQRLAERRRRAPVPAAQQAGASWNRMPEFARVLRTVDADLGERFDKWTQGLAQTARISGASITPADMPLLDQVVTEAI
RSPEFRSSFGQFLSDHTLKTLNMDGMTQVGGFGPAVRGDVKTAFAEMLKHKLMHTQDHQTALGLLQDALQNPDLGLSREM
LLRSRNELTGRVEMWPPLKAYISMHDVEGQAAQDAAITWTMAQFEEAQQGGIGDAEAKQESERAQANANRFIEQRARVLL
REWDIR
|
|
