Name : hrpF
Accession : AAP34358.1
PAI name : Hrp PAI
PAI accession : AF499777
Strain : Xanthomonas axonopodis 306
Virulence or Resistance: Virulence
Product : HrpF
Function : -
Note : similar to Sinorhizobium fredii NolX protein
Homologs in the searched genomes : 17 hits ( 17 protein-level )
Publication :
-Kim,J.-G., Park,B.K., Yoo,C.-H. and Hwang,I., "Direct Submission", Submitted (09-APR-2002) School of Agricultural Biotechnology, Seoul National University, 103 Seodundong, Kwonsungu, Suwon, Kyunggido 441-744, Korea.
-Kim,J.G., Park,B.K., Yoo,C.H., Jeon,E., Oh,J. and Hwang,I., "Characterization of the Xanthomonas axonopodis pv. glycines Hrp pathogenicity island", J. Bacteriol. 185 (10), 3155-3166 (2003) PUBMED 12730176.
| DNA sequence : | |
ATGTCGCTCAATACACTTTCTACCGGGAGCAACCCCAGCCAATTGCTGGGCACTCCTCTAAATGAGTCCGATTCGTCGGA
GCTGTTGGGGTCGGATTCTTCCAAGGATGACTCCGATCTGCCGTCGACGATGGACGACATCTTTCTGCTGATCTACCAGC
TGCTGGCAGCCCTCCAAACCAACGCGCCAACGAGTACATCAGGCAACGGGTCAGCCGATGCACCAACAAGCGCGCCAAGC
GGTGATGCCAGCACCCCGGCTTCTGCATCGGACGATCAAGCCAACCAGCCGATCGAGAAGCGCACCTCGTGGCCATCGCT
GGGCTACGACTTCGATCCCAAGGACATCAAGGGTAAGGACGCGCCACCAGCATTGGAGGGCTCAACGGTCACCTGGAACG
GTGGCACGCTCACACCATCGGAGCTGCAGATCGTTTCGACCTTGAATGCCCACAAGGATCAGATGCCGCTCGAATACAAA
AATCTCGATGACAAGATCAACGACCCTTCCACGCCCGCCGACCTGAAGGCCGCATTGCAGGGACTGAAGCAGGACCCGCG
CTTGTTCTTTGCGATCGGTTCGCAGGGAGACGGCAAGTGCGGCGGCAAGATCAAGGCGCAGGATCTCTGGGATTTCTCCG
ATTCGCATCCGCAGGTCAAGGCGATGGGCGGGAAGAACGACCAGTTCAACCCCAAGGACATCAAGGGATCGACGCCACCT
CCCGCCGTCGATGGCTCATCGGTCACCTGGGATGGTGGAACGCTCACCCAGAATGAGCTGGAAATCGTCAGTACGCTCAA
TCGCCATAAGGATCAGTGCCCACTCAAGTGGTCCGATCTGGATGCAAAGATCAACGACCCGTCGACACCACCGGATCTGA
AGAAGGCATTGACGGACTTGCAGTCGGACCCGCGGCTGTTCTTCGCGATCGGCTCGCAAGGTGATGGCAAGTGCGGCGGC
AAGATCAAAGACGGCGATCTCGGCAAGTTCGTCTCCCACCATGCGCAGGTCGCCGAGTACGCCGACAAGCAAGCAAAGAG
CTACACACAGAACTACGTGGCCTCGGACAGCCCGGACAAGACCAAGGCGTCGGTAATGAACGAGAGCGATGCCATGCGTG
AGCTGTACCGCTATTCGGACTATCTGCCGGACGATCTGAATCAGGATACCTTCAAGTCTCTGGTGGATGGCGAAAGCAGC
ACCAAGAAATGTCCGCCGCAGGTCATCGCTGCCGCACAGTATTTTCGTGATCATCCCGACCAGTGGAAAGCGCTGGCAGG
AGACTCCGGCTCGATGAGCAAACCGGACTTCCTGCAGAAAGCCAGCTCCGAGATTCACCTGACGGCGGACGAGCGGAAGA
CGCTGGACACCATCAACAGTCATCAAGACGCTTTTTACGGCGATGGCAAGGAAGTGACCCGCGACAAGCTCGACTCCATT
TCCAAGGACGACAAGGCCGACCCCGCGGTGAAAGAGGCCGCGACGCAGTTGTTGAGCGATCCGTTGCTGTTCGGGTTGTT
GAACAACTCGATCACCGGCTACAAGAAGCCACATCGCTTCTTCGGGGGTGGTCATGTCGTCGACTCGGGCAAGATCAGCC
AGGACGATTTCCGGCGGTTCTACGACAACATGAGCGCAGCCAACAAGACCGTGGACAAGCCGGTCACGCACGATGCCAGC
TCGGCCGAGCAGCAAAAGGCCGTCTCGGACATGCTGATGGGCAAGGACGATCCGCCCGCGATCAAGAAGCCCAAAAAAGA
CGTCGGCGTGTTCCAGGAGGGCTTGCACGAGTTCCTCAAGTGGGACAGCAAGATCCTGGACTGGATGTCCGTTGGCCTCA
GCGCATTGAATGGGATTCCCATCATCGGCGAAATTACCGATGCGGCGTCGATTGCATTGGAAAGCGAGGCGCAGGCGGCG
CAGGTGGTCGACACCGCGATTCAAGGTGGCGACATGTCGCTTGCCTTGAAGCTGGCCGGCATCAATATGGCCGGAGCAGT
GGTTGGAGCAGTCGGCGGACCCACGGCCAGAATCGGAGCCAAGGCGGTCGCCAAAGGAGTCGCCGAAGCCGCGGCCAAGG
GAACAGCTGAGGGTGCGGCCAAGGGAACTGCCAAGGGCGTGGCCAAAGGTGCGGGTAGAACGGCGGCCGAACGGCCGAGC
GCCGCGAAGTTCGCAAAAGGCTATGTCGGCGGCACTGCCATCAGTAAATCGGTTGAAATTCTCAAGACGCCCGTCTTGGC
GGGCTTGCATTACGAAGAATATCAACTGGACAAGCAGAAAGAAGGAGAGATCCACCAGAAGATGGAAAACGCCGGCGGCA
TCCCGATGGGTAAGCAGATTGTTCCCACGAACGTTGCCAACAATTTCGAGGGAGACCTGCGACAGAACCTGAGGAATATC
AGAGTGCGTCGTAGATAA
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| Protein sequence : | |
MSLNTLSTGSNPSQLLGTPLNESDSSELLGSDSSKDDSDLPSTMDDIFLLIYQLLAALQTNAPTSTSGNGSADAPTSAPS
GDASTPASASDDQANQPIEKRTSWPSLGYDFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYK
NLDDKINDPSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGSTPP
PAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKALTDLQSDPRLFFAIGSQGDGKCGG
KIKDGDLGKFVSHHAQVAEYADKQAKSYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESS
TKKCPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADERKTLDTINSHQDAFYGDGKEVTRDKLDSI
SKDDKADPAVKEAATQLLSDPLLFGLLNNSITGYKKPHRFFGGGHVVDSGKISQDDFRRFYDNMSAANKTVDKPVTHDAS
SAEQQKAVSDMLMGKDDPPAIKKPKKDVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAA
QVVDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARIGAKAVAKGVAEAAAKGTAEGAAKGTAKGVAKGAGRTAAERPS
AAKFAKGYVGGTAISKSVEILKTPVLAGLHYEEYQLDKQKEGEIHQKMENAGGIPMGKQIVPTNVANNFEGDLRQNLRNI
RVRRR
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