Name : avrPphD1
Accession : AAO33448.1
PAI name : Not named
PAI accession : AF469470
Strain : Pseudomonas syringae 1448A
Virulence or Resistance: Not determined
Product : AvrPphD1
Function : -
Note : similar to Pseudomonas syringae pv. phaseolicola AvrPphD
Homologs in the searched genomes : 4 hits ( 3 protein-level, 1 DNA-level )
Publication :
-Badel,J.L. and Collmer,A., "Direct Submission", Submitted (17-JAN-2002) Plant Pathology, Cornell University, 342 Plant Science Building, Ithaca, NY 14853, USA.
-Badel,J.L., Charkowski,A.O., Deng,W.L. and Collmer,A., "A gene in the Pseudomonas syringae pv. tomato Hrp pathogenicity island conserved effector locus, hopPtoA1, contributes to efficient formation of bacterial colonies in planta and is duplicated elsewhere in the genome", Mol. Plant Microbe Interact. 15 (10), 1014-1024 (2002) PUBMED 12437299.
| DNA sequence : | |
ATGAGTCGCGTTCTCTCACAAGATGCAGTAGATGGCAGTGGCTTGGAAAGTCCGTTACTGAGCTCGCGAGCACATTCTCG
TCCGCCATCACAGCCAGAGCCCGTGCATATCGGATCAGTCCGCAGGGACTCTGGCAGCCTTGTTTCCGATAACCCGGTAG
TGCACGCACTGCTAGCCTTCGCGCAGGCCGACCAGGCATTCCCACCACAGGCCGCTAGCATTGACGGAGTCCAGCTGGAA
ATGCGGCCAACTCGAGATATTGAGCAAGCACTTAAGAAATTCAAAGATGCCTTCACGGTGGAGAAGGCGCAACTGATGTC
CGTTACAAACTCGTCGGAGCGGGCAGATGAGGATATCAACGCAGACATCCATATCCCGTTATTGCTTAAGGCCATTGAGC
AGGGTGCTGCGGCATTTGGCCCAAACGCATCGATCGGCCAGAATAGCGCGAAAGCGTTTCTCGCCTCGTGTGCTCCCACG
ATCACGTCTAATGACGATGTCCTCTCAGCGTTCATCAACCAGAAGCTGAAGGGGGACGATGATCTTAAGGTACGCCTAGG
CGCACAGGAATTGTTGCACGTCGCCACCAAGAAAGAGTTTCAACTCGGCGGTCTTGCCGGCAGCATCGGGGTCAGCAGCA
TACTCGGCTCGGCATGGGAGCTTGGAGCTTCGGAACTGTTGAAAAATGCCATCTTCGGCAAAAACTTCTCACCCAGTCAA
TATGCCCTGCAATTGGCCGGGATCGATTCGGTGCCTCCTTTGATGATCGAGTCCATGGACACCATGTGCGTACTTGCCAT
CATCAAGGGTATGAAAGGTGAGGAGTGGTCCATGAGCGATCTACTCCCCAAGGCGTTGAAGGCCGGCGCCATCTCATCGG
TGGTCTCATTCCCCAATAATGTTTTGCAGTATGCAGGCTTCAAATCCAGAGTCGGCGATCTTGCCGCAAACTCGGTGACA
ACTGAAGCGGCAATCTTTGGCGCCGCCTCCGGTATTCCACCCGAGGTCAAGGAAAGTGAAGAGCTGATGCGTGCTGGCTT
GTTCCAAAGCATGAAGGACGGCGTGATGGCTCATCCCGGCGAGGGGGTGGACACCAAAGAGACGATTGAGCGGATGACGC
GCCATGCGCTGGATATCGCTCCGGGTGAAAGCACCGCTGTCAAGTCCATGGGGCTGGCATCGATTGTCGGGATGATTCCA
CTGATTGCCAGCAACAAGGCAACCGGGCTGCTGTCAGAACAGGTACTGCGTATTTTTCGGAGCGCCGTCTTCAATCCAAT
CGAAGCCATCGCTCTGAACGCGTTGGCGCTAGGAGGGCGTGTCAACGTTCCCGGGCTATTTGATTCCGACAATGCAAAGC
ATGCACGCGTGGTACAAACCATTCTTGCGCGGGCCAGCCAGCAAATGGAAGCTGGAGACCGTAACATTTCCGCAGAGGAG
CTACATCAAATGCTGGCTCCCCGGAGCGAGTTCCTGCGCCATGTGGGATCTGCGATTGTCAACGGCATGAATGCCAGCTT
TGAGGCAATTCCCGCGCTGGCTCGGAAGCT
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| Protein sequence : | |
MSRVLSQDAVDGSGLESPLLSSRAHSRPPSQPEPVHIGSVRRDSGSLVSDNPVVHALLAFAQADQAFPPQAASIDGVQLE
MRPTRDIEQALKKFKDAFTVEKAQLMSVTNSSERADEDINADIHIPLLLKAIEQGAAAFGPNASIGQNSAKAFLASCAPT
ITSNDDVLSAFINQKLKGDDDLKVRLGAQELLHVATKKEFQLGGLAGSIGVSSILGSAWELGASELLKNAIFGKNFSPSQ
YALQLAGIDSVPPLMIESMDTMCVLAIIKGMKGEEWSMSDLLPKALKAGAISSVVSFPNNVLQYAGFKSRVGDLAANSVT
TEAAIFGAASGIPPEVKESEELMRAGLFQSMKDGVMAHPGEGVDTKETIERMTRHALDIAPGESTAVKSMGLASIVGMIP
LIASNKATGLLSEQVLRIFRSAVFNPIEAIALNALALGGRVNVPGLFDSDNAKHARVVQTILARASQQMEAGDRNISAEE
LHQMLAPRSEFLRHVGSAIVNGMNASFEAIPALARKL
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