Name : lopB
Accession : AAO18055.1
PAI name : TTSS locus
PAI accession : AY144116
Strain : Photorhabdus luminescens TTO1
Virulence or Resistance: Virulence
Product : LopB
Function : -
Note : similar to Pseudomonas aeruginosa PopB translocator protein
Homologs in the searched genomes : 24 hits ( 24 protein-level )
Publication :
-Waterfield,N.R. and ffrench-Constant,R.H., "Direct Submission", Submitted (22-AUG-2002) Biology and Biochemistry, University of Bath, Claverton Down, Bath BA2 7AY, UK.
-Waterfield,N.R., Daborn,P.J. and ffrench-Constant,R.H., "Genomic islands in Photorhabdus", Trends Microbiol. 10 (12), 541-545 (2002) PUBMED 12564983.
| DNA sequence : | |
ATGGTTCAAGTCAGTGAATCTAAAGTTCTTCAACCGAGGGTCGACAGTTTTCAAGTTGATGAAATCCTCGCAACTATACC
CCCTAAAAGCGAGCAGCATGTTACGCCTAGCCAGGCAAGTGACTTGTCTACTGATGTAGCTAAGTCACGAAGGGTATCAT
TGCCAGCGCCATTGGCTGTGAGTAATACCCGCCTTGGGCGAGAAGAAATGGCTAAGCTCGAATCGATTATGCAAGAGGCT
AAGCAGGCTACAGGGCTGATAAAGGCACTGACAGCAAAGCTGACAGAAACTTCGCGGTTGGCTTCTCTATTACTATCTTC
ATCTGAGGCAATAGAGATTGAATTGGGCAAATTGACCAGCGAGCTTGATCGTAATCAGACAAATCTCAAAATCCAAGATA
TCCAGCGAGCACGTCAGCAAAGCTTGCAGAAAATGGATGAGAACCAGCAGAAGATTAAAGAAGCTGAAAATTCTGCTAAA
GAGGCGCAAAAATCTGGATTATTTTCCAAGATCTTTGGTTGGATCAGTGCGATTGCTTCAATTGTGGTCGGAGCAATTAT
GGTGGCCACCGGTGTTGGCGCGATAGCTGGCGCGATGCTAATTGCCGGAGGAGTAGTGGGAGCAGTATCTCAGGGACTAC
AACAGGCGGCTCAAGATGGTTTAATCAGCAAGGAAACCATGAAATGGTTGGGTCCAGCAATGATGGCGATTGAGATTATA
GTGTCTTTGGCGGCGCTGGCAGTCAGTTTTGGTGGCTCGGCAGCTGGGATTATAGCCAAAATGGGATCTAAGATTGGCGG
TAAAGCGGCTGAGATGGCAGCTAAGGCTGCGGAGTTTTCTGCTAAAGCTGCCAGTATGGCCGCGAATACCACGGCTCGGA
GCGTGAAATTGGCTGTACAGGTAAGTGACATGACAGTGGATTTTGCTAATGGCGCCGCTCAAACTGTCAATACAGCCTTC
CAGAGTAAAGCGGCTGACCGACAAGCTGACGTACAGCTTTCACGTAGTGAATTGACTGCGTTTCAGGCTGTTATGGACAG
GCTTAAAGAGGAGTTGTCCCAAATGGTAGAGTCTTTCCAACATGTGATGGAAATGATTTTCCAGATGCTCAATGCCAGGG
GAGACATGATAAATAACCTTGCCAGCCGACCACAGGAAATTTAG
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| Protein sequence : | |
MVQVSESKVLQPRVDSFQVDEILATIPPKSEQHVTPSQASDLSTDVAKSRRVSLPAPLAVSNTRLGREEMAKLESIMQEA
KQATGLIKALTAKLTETSRLASLLLSSSEAIEIELGKLTSELDRNQTNLKIQDIQRARQQSLQKMDENQQKIKEAENSAK
EAQKSGLFSKIFGWISAIASIVVGAIMVATGVGAIAGAMLIAGGVVGAVSQGLQQAAQDGLISKETMKWLGPAMMAIEII
VSLAALAVSFGGSAAGIIAKMGSKIGGKAAEMAAKAAEFSAKAASMAANTTARSVKLAVQVSDMTVDFANGAAQTVNTAF
QSKAADRQADVQLSRSELTAFQAVMDRLKEELSQMVESFQHVMEMIFQMLNARGDMINNLASRPQEI
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