Name : lssD
Accession : AAO18050.1
PAI name : TTSS locus
PAI accession : AY144116
Strain : Photorhabdus luminescens TTO1
Virulence or Resistance: Virulence
Product : LssD
Function : -
Note : similar to Pseudomonas aeruginosa PcrD type III secretory apparatus protein
Homologs in the searched genomes : 346 hits ( 346 protein-level )
Publication :
-Waterfield,N.R. and ffrench-Constant,R.H., "Direct Submission", Submitted (22-AUG-2002) Biology and Biochemistry, University of Bath, Claverton Down, Bath BA2 7AY, UK.
-Waterfield,N.R., Daborn,P.J. and ffrench-Constant,R.H., "Genomic islands in Photorhabdus", Trends Microbiol. 10 (12), 541-545 (2002) PUBMED 12564983.
| DNA sequence : | |
ATGAGCCGTGGGTTTGCGTTATTGCGTCTGATTGGCGAGCGTAAAGACATCATGTTGGCGATATTGTTGCTAGCTGTGGT
CTTCATGATGGTGTTGCCGCTTCCGCCTATCCTGCTTGACATTTTGATCGCTATTAATATGACCATCTCTGTTGTGCTCA
TGATGATGGCGGTCTATATCAATTCCCCCTTACAGTTTTCCGCTTTTCCTGCGGTCTTACTGGTGACAACGCTATTTCGT
CTGGCGCTTTCAGTCAGTACCACCCGGATGATTCTCCTACAAGCCGATGCCGGTAAGATAGTCTATACCTTCGGTAATTT
CGTTGTCGGCGGCAACCTGATTGTCGGGATAGTGATCTTTCTGATCATCACCATTGTACAATTTATCGTCATAACCAAAG
GTTCGGAACGCGTAGCTGAGGTGAGCGCCCGTTTTTCCCTTGATGCCATGCCCGGTAAACAGATGAGTATCGACGGAGAT
ATGCGTGCCGGCGTTATTGACGTCAATGAAGCCAGAGAGAGGCGCAGCATTATCGAAAAAGAGAGCCAGATGTTTGGTTC
GATGGATGGTGCGATGAAATTTGTTAAGGGTGATGCGATTGCAAGTCTCCTTATCATCTTTGTCAACATTTTGGGTGGGA
TAACCATAGGAGTCACCCAGAAAGGGATGTCGGCGGCTGATGCATTGCAGCTCTACGCTATTTTGACCGTTGGTGATGGT
ATGGTCTCTCAGGTTCCGGCGCTATTGATCGCTATCACCGCGGGTATCATTGTTACCCGGGTTTCGTCGGAAGACGCCTC
GGATCTGGGTAATGAGATCGGCGAGCAGGTTGTTGCCCAACCAAAGGCGCTGCTGATTGGCGGTGTTTTATTGGTGCTAT
TTGGCCTTATTCCCGGATTCCCTACATTAACCTTCTTAACGCTTGCACTGGTAGTGGCAGGTGGCGGTTATTTGCTGTTC
CAACGCCAGCGACAAGCCAGCGCCAGCCAGGAAACGGATCTTCCTAGCCTATTAGCCCAAGGAGCAGGCGCCCCGGCAGC
CAAACCTAAGCCCAAAAGCGGTAGTAAGGCCAAAGCTGGCAAGCTGAGTGAGAAAGAGGAATTTGCGATGACGGTTCCTT
TGCTTATTGATGTGGATGCGGGATTACAGGCTGAACTGGAAGCTATTTCACTGAATGATGAATTAATACGGGTACGACGC
GCCCTCTATTTGGATTTAGGGGTACCATTTCCGGGTATCCACTTACGCTTTAATGAGGGAATGAAGGAAGGGGAATACCT
GATCCAGCTACAAGAAGTGCCTGTTGCCCGTGGTCGGCTTCGTTCATCACATTTGCTGGTGCAGGAACCGGTCAGTCAGT
TGGAATTGCTGGCTATTCCTTATGAAGAGGGGGAACCGCTATTACCTAATCAGCCTACTCTGTGGGTAGCCGAAGCACAT
CAGGAACGTTTGGCGAAGTCCGGGCTGGCGGTTTTATCCATGTCTCAGGTGATCACTTGGCATTTATCACATGTGTTGCG
GGAGTACGCCGAAGATTTTATTGGCGTGCAGGAAACCCGTTATCTTCTGGAACAGATGGAGGGTAGCTATGGTGAATTGG
TCAAGGAGGCCATGCGCATCATTCCATTGCAGCGGATGACTGAGATATTGCAACGGTTGGTCGGTGAGGATATCTCCATT
CGTAATACACGTGCGATTCTTGAAGCTATGGTGGTGTGGGGGCAGAAGGAGAAAGATGTAGTGCAATTAACGGAATATAT
TCGCAGTAGTCTCAAGCGTTACATTTGTTACAAGTATGCTAATGGTAACAATATCCTGCCCGCCTATCTATTAGATCAAC
AGGTAGAGGAGCAGATCCGGAGTGGTATTCGTCAAACGAGCGCAGGTAGTTATCTGGCGCTGGACCCAGCGGTGACGCAA
AGTTTCCTTGAACAGATGAAGAAAACAGTGGGCGATTTAACACAAATGCAGAATAAGCCAGTGTTAATCGTATCAATGGA
TATTCGTCGCTATGTCCGTAAGTTAATTGAAGGTGATCACCACGGCTTACCGGTACTCTCGTATCAAGAGTTGACTCAAC
AGATCAATATCCAACCTCTTGGCAGGGTGTGCCTATGA
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| Protein sequence : | |
MSRGFALLRLIGERKDIMLAILLLAVVFMMVLPLPPILLDILIAINMTISVVLMMMAVYINSPLQFSAFPAVLLVTTLFR
LALSVSTTRMILLQADAGKIVYTFGNFVVGGNLIVGIVIFLIITIVQFIVITKGSERVAEVSARFSLDAMPGKQMSIDGD
MRAGVIDVNEARERRSIIEKESQMFGSMDGAMKFVKGDAIASLLIIFVNILGGITIGVTQKGMSAADALQLYAILTVGDG
MVSQVPALLIAITAGIIVTRVSSEDASDLGNEIGEQVVAQPKALLIGGVLLVLFGLIPGFPTLTFLTLALVVAGGGYLLF
QRQRQASASQETDLPSLLAQGAGAPAAKPKPKSGSKAKAGKLSEKEEFAMTVPLLIDVDAGLQAELEAISLNDELIRVRR
ALYLDLGVPFPGIHLRFNEGMKEGEYLIQLQEVPVARGRLRSSHLLVQEPVSQLELLAIPYEEGEPLLPNQPTLWVAEAH
QERLAKSGLAVLSMSQVITWHLSHVLREYAEDFIGVQETRYLLEQMEGSYGELVKEAMRIIPLQRMTEILQRLVGEDISI
RNTRAILEAMVVWGQKEKDVVQLTEYIRSSLKRYICYKYANGNNILPAYLLDQQVEEQIRSGIRQTSAGSYLALDPAVTQ
SFLEQMKKTVGDLTQMQNKPVLIVSMDIRRYVRKLIEGDHHGLPVLSYQELTQQINIQPLGRVCL
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